Visualizing multi-protein patterns at the synapse of neuronal tissue with DNA-assisted single-molecule localization microscopy

作者: Thomas Kuner , Maja Klevanski , Mike Heilemann , Mike Heilemann , Marina S. Dietz

DOI: 10.1101/2021.02.23.432306

关键词: BiomoleculeDNAMacromoleculeBiophysicsPostsynapseMicroscopyChromatic aberrationOligonucleotideBiomolecular structureChemistry

摘要: The development of super-resolution microscopy (SRM) has widened our understanding biomolecular structure and function in biological materials. Imaging multiple targets within a single area would elucidate their spatial localization relative to the cell matrix neighboring biomolecules, revealing multi-protein macromolecular structures functional co-dependencies. SRM methods are, however, limited number suitable fluorophores that can be imaged during acquisition as well loss antigens antibody washing restaining for organic dye multiplexing. We report visualization protein pre- postsynapse 350-400 nm thick neuronal tissue sections using DNA-assisted single-molecule microscopy. Using antibodies labeled with short DNA oligonucleotides, are visualized successively by sequential exchange fluorophore-labeled complementary oligonucleotides present imaging buffer. structural integrity is maintained owing only labelling step sample preparation. Multiple laser wavelength, minimizing chromatic aberration. This method proved robust multi-target semi-thin sections, paving way towards biology

参考文章(37)
Kurt Sätzler, Leander F. Söhl, Johann H. Bollmann, J. Gerard G. Borst, Michael Frotscher, Bert Sakmann, Joachim H. R. Lübke, Three-Dimensional Reconstruction of a Calyx of Held and Its Postsynaptic Principal Neuron in the Medial Nucleus of the Trapezoid Body The Journal of Neuroscience. ,vol. 22, pp. 10567- 10579 ,(2002) , 10.1523/JNEUROSCI.22-24-10567.2002
Patrik Verstreken, Cindy V. Ly, Koen J.T. Venken, Tong-Wey Koh, Yi Zhou, Hugo J. Bellen, Synaptic Mitochondria Are Critical for Mobilization of Reserve Pool Vesicles at Drosophila Neuromuscular Junctions Neuron. ,vol. 47, pp. 365- 378 ,(2005) , 10.1016/J.NEURON.2005.06.018
Harvey B. Sarnat, Clinical neuropathology practice guide 5-2013: markers of neuronal maturation. Clinical Neuropathology. ,vol. 32, pp. 340- 369 ,(2013) , 10.5414/NP300638
Ralf Jungmann, Maier S Avendaño, Johannes B Woehrstein, Mingjie Dai, William M Shih, Peng Yin, Multiplexed 3D cellular super-resolution imaging with DNA-PAINT and Exchange-PAINT Nature Methods. ,vol. 11, pp. 313- 318 ,(2014) , 10.1038/NMETH.2835
Ulrike Endesfelder, Sebastian Malkusch, Franziska Fricke, Mike Heilemann, A simple method to estimate the average localization precision of a single-molecule localization microscopy experiment Histochemistry and Cell Biology. ,vol. 141, pp. 629- 638 ,(2014) , 10.1007/S00418-014-1192-3
K. Mukherjee, X. Yang, S. H. Gerber, H.-B. Kwon, A. Ho, P. E. Castillo, X. Liu, T. C. Sudhof, Piccolo and bassoon maintain synaptic vesicle clustering without directly participating in vesicle exocytosis Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 6504- 6509 ,(2010) , 10.1073/PNAS.1002307107
Stefan Hallermann, Anna Fejtova, Hartmut Schmidt, Annika Weyhersmüller, R. Angus Silver, Eckart D. Gundelfinger, Jens Eilers, Bassoon Speeds Vesicle Reloading at a Central Excitatory Synapse Neuron. ,vol. 68, pp. 710- 723 ,(2010) , 10.1016/J.NEURON.2010.10.026
Anna Dondzillo, Kurt Sätzler, Heinz Horstmann, Wilko D. Altrock, Eckart D. Gundelfinger, Thomas Kuner, Targeted three-dimensional immunohistochemistry reveals localization of presynaptic proteins Bassoon and Piccolo in the rat calyx of Held before and after the onset of hearing. The Journal of Comparative Neurology. ,vol. 518, pp. 1008- 1029 ,(2010) , 10.1002/CNE.22260
Carlas S Smith, Nikolai Joseph, Bernd Rieger, Keith A Lidke, Fast, single-molecule localization that achieves theoretically minimum uncertainty Nature Methods. ,vol. 7, pp. 373- 375 ,(2010) , 10.1038/NMETH.1449
Mike Heilemann, Sebastian van de Linde, Mark Schüttpelz, Robert Kasper, Britta Seefeldt, Anindita Mukherjee, Philip Tinnefeld, Markus Sauer, Subdiffraction-Resolution Fluorescence Imaging with Conventional Fluorescent Probes† Angewandte Chemie. ,vol. 47, pp. 6172- 6176 ,(2008) , 10.1002/ANIE.200802376