Identification of microbial communities, with a focus on foodborne pathogens, during kimchi manufacturing process using culture-independent and -dependent analyses

作者: Hae-Won Lee , So-Ra Yoon , Su-Ji Kim , Hee Min Lee , Jae Yong Lee

DOI: 10.1016/J.LWT.2017.04.001

关键词: Campylobacter jejuniBiologyCampylobacterListeria monocytogenesBacillus cereusVibrioFood scienceShigellaAeromonasMicrobiologySalmonella

摘要: Abstract Little is known about microbial communities associated with the kimchi manufacturing process. We investigated structure of communities, focusing on foodborne pathogens, such as Bacillus cereus, enterohemorrhagic Escherichia coli, Clostridium perfringens, Campylobacter jejuni, Staphylococcus aureus, Salmonella spp., Listeria monocytogenes, and Yersinia enterocolitica, during process, including brining, washing, condiment stuffing phases, using culture-dependent culture-independent analyses. Foodborne pathogens were not identified in any test sample by analysis, whereas analysis targeting hypervariable regions V3 V4 16S rRNA gene detected traces general or potential Enterobacter Shigella Serratia Vibrio Aeromonas Acinetobacter Pseudomonas Enterococcus spp. However, process proceeded, community changed, replaced probiotics, lactic acid bacteria. Our results suggest that it may be worth utilizing to complement for microbiological quality control

参考文章(37)
A.I. Saeed, V. Sharov, J. White, J. Li, W. Liang, N. Bhagabati, J. Braisted, M. Klapa, T. Currier, M. Thiagarajan, A. Sturn, M. Snuffin, A. Rezantsev, D. Popov, A. Ryltsov, E. Kostukovich, I. Borisovsky, Z. Liu, A. Vinsavich, V. Trush, J. Quackenbush, TM4: a free, open-source system for microarray data management and analysis. BioTechniques. ,vol. 34, pp. 374- 378 ,(2003) , 10.2144/03342MT01
Vincenzina Fusco, Grazia Marina Quero, Culture‐Dependent and Culture‐Independent Nucleic‐Acid‐Based Methods Used in the Microbial Safety Assessment of Milk and Dairy Products Comprehensive Reviews in Food Science and Food Safety. ,vol. 13, pp. 493- 537 ,(2014) , 10.1111/1541-4337.12074
Y. INATSU, M. L. BARI, S. KAWASAKI, K. ISSHIKI, Survival of Escherichia coli O157:H7, Salmonella Enteritidis, Staphylococcus aureus, and Listeria monocytogenes in Kimchi Journal of Food Protection. ,vol. 67, pp. 1497- 1500 ,(2004) , 10.4315/0362-028X-67.7.1497
Kun-Young Park, Ji-Kang Jeong, Young-Eun Lee, James W. Daily, Health Benefits of Kimchi (Korean Fermented Vegetables) as a Probiotic Food Journal of Medicinal Food. ,vol. 17, pp. 6- 20 ,(2014) , 10.1089/JMF.2013.3083
Cátia Pinto, Diogo Pinho, Remy Cardoso, Valéria Custódio, Joana Fernandes, Susana Sousa, Miguel Pinheiro, Conceição Egas, Ana C Gomes, None, Wine fermentation microbiome: a landscape from different Portuguese wine appellations Frontiers in Microbiology. ,vol. 6, pp. 905- 905 ,(2015) , 10.3389/FMICB.2015.00905
Eun-Jin Park, Jongsik Chun, Chang-Jun Cha, Wan-Soo Park, Che Ok Jeon, Jin-Woo Bae, Bacterial community analysis during fermentation of ten representative kinds of kimchi with barcoded pyrosequencing Food Microbiology. ,vol. 30, pp. 197- 204 ,(2012) , 10.1016/J.FM.2011.10.011
Seong Woon Roh, Kyoung-Ho Kim, Young-Do Nam, Ho-Won Chang, Eun-Jin Park, Jin-Woo Bae, Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing. The ISME Journal. ,vol. 4, pp. 1- 16 ,(2010) , 10.1038/ISMEJ.2009.83
Ji Young Jung, Se Hee Lee, Jeong Myeong Kim, Moon Su Park, Jin-Woo Bae, Yoonsoo Hahn, Eugene L. Madsen, Che Ok Jeon, Metagenomic Analysis of Kimchi, a Traditional Korean Fermented Food† Applied and Environmental Microbiology. ,vol. 77, pp. 2264- 2274 ,(2011) , 10.1128/AEM.02157-10