Contributions of ammonia-oxidizing archaea and bacteria to nitrification in Oregon forest soils

作者: Xinda Lu , Peter J. Bottomley , David D. Myrold

DOI: 10.1016/J.SOILBIO.2015.02.034

关键词: Environmental chemistryNitrificationSoil waterAlnus rubraBotanySoil pHAlderAmmonia monooxygenaseAmendmentBiologyArchaea

摘要: Ammonia oxidation, the first step of nitrification, is mediated by both ammonia-oxidizing archaea (AOA) and bacteria (AOB); however, the relative contributions of AOA and AOB to soil nitrification are not well understood. In this study we used 1-octyne to discriminate between AOA-and AOB-supported nitrification determined both in soil-water slurries and in unsaturated whole soil at field moisture. Soils were collected from stands of red alder (Alnus rubra Bong.) and Douglas-fir (Pseudotsuga menziesii Mirb. Franco) at three sites (Cascade …

参考文章(53)
Hang-Wei Hu, Zhi-Hong Xu, Ji-Zheng He, Ammonia-Oxidizing Archaea Play a Predominant Role in Acid Soil Nitrification Advances in Agronomy. ,vol. 125, pp. 261- 302 ,(2014) , 10.1016/B978-0-12-800137-0.00006-6
Lisa Y. Stein, Heterotrophic Nitrification and Nitrifier Denitrification John Wiley & Sons, Ltd. pp. 95- 114 ,(2014) , 10.1128/9781555817145.CH5
Cécile Gubry-Rangin, Graeme W. Nicol, James I. Prosser, Archaea rather than bacteria control nitrification in two agricultural acidic soils FEMS Microbiology Ecology. ,vol. 74, pp. 566- 574 ,(2010) , 10.1111/J.1574-6941.2010.00971.X
W. De Boer, P. J. A. Klein Gunnewiek, M. Veenhuis, E. Bock, H. J. Laanbroek, Nitrification at low pH by aggregated chemolithotrophic bacteria Applied and Environmental Microbiology. ,vol. 57, pp. 3600- 3604 ,(1991) , 10.1128/AEM.57.12.3600-3604.1991
John R. Stephen, George A. Kowalchuk, Mary-Ann V. Bruns, Allison E. McCaig, Carol J. Phillips, T. Martin Embley, James I. Prosser, Analysis of β-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing Applied and Environmental Microbiology. ,vol. 64, pp. 2958- 2965 ,(1998) , 10.1128/AEM.64.8.2958-2965.1998
Peter M. Vitousek, James R. Gosz, Charles C. Grier, Jerry M. Melillo, William A. Reiners, A Comparative Analysis of Potential Nitrification and Nitrate Mobility in Forest Ecosystems Ecological Monographs. ,vol. 52, pp. 155- 177 ,(1982) , 10.2307/1942609
Eva Spieck, Michael Meincke, Eberhard Bock, Taxonomic diversity of Nitrosovibrio strains isolated from building sandstones Fems Microbiology Letters. ,vol. 102, pp. 21- 26 ,(1992) , 10.1111/J.1574-6968.1992.TB05791.X
L. E. Lehtovirta-Morley, K. Stoecker, A. Vilcinskas, J. I. Prosser, G. W. Nicol, Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil Proceedings of the National Academy of Sciences of the United States of America. ,vol. 108, pp. 15892- 15897 ,(2011) , 10.1073/PNAS.1107196108
Maria Tourna, Thomas E Freitag, Graeme W Nicol, James I Prosser, None, Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms. Environmental Microbiology. ,vol. 10, pp. 1357- 1364 ,(2008) , 10.1111/J.1462-2920.2007.01563.X