Development of Single-Stranded DNA Aptamers for Specific Bisphenol A Detection

作者: Minjoung Jo , Ji-Young Ahn , Joohyung Lee , Seram Lee , Sun Woo Hong

DOI: 10.1089/OLI.2010.0267

关键词: Small moleculeSELEX Aptamer TechniqueCombinatorial chemistryBinding siteBiochipMolecular biologyBiologyOligonucleotideSystematic evolution of ligands by exponential enrichmentAptamerBisphenol A

摘要: The development of reagents with high affinity and specificity to small molecules is crucial for the high-throughput detection chemical compounds, such as toxicants or pollutants. Aptamers are short single-stranded (ss) oligonucleotides able recognize target affinity. Here, we report selection ssDNA aptamers that bind Bisphenol A (BPA), an environmental hormone. Using SELEX process, isolated BPA from a 1015 random library 60 mer ssDNAs. selected bound specifically BPA, but not structurally similar molecules, B one methyl group difference, 4,4′-Bisphenol 2 groups difference. these aptamers, developed aptamer-based sol–gel biochip detected dissolved in water. This novel can be further applied universal high-specificity molecules.

参考文章(25)
F Freymuth, M Quibriac, J Petitjean, M L Amiel, P Pothier, A Denis, J F Duhamel, Comparison of two new tests for rapid diagnosis of respiratory syncytial virus infections by enzyme-linked immunosorbent assay and immunofluorescence techniques. Journal of Clinical Microbiology. ,vol. 24, pp. 1013- 1016 ,(1986) , 10.1128/JCM.24.6.1013-1016.1986
L. Gold, D. Brown, Y.-y. He, T. Shtatland, B. S. Singer, Y. Wu, From Oligonucleotide Shapes to Genomic SELEX: Novel Biological Regulatory Loops Proceedings of the National Academy of Sciences of the United States of America. ,vol. 94, pp. 59- 64 ,(1997) , 10.1073/PNAS.94.1.59
Seram Lee, Young Sook Kim, Minjung Jo, Moonsoo Jin, Dong-ki Lee, Soyoun Kim, Chip-based detection of hepatitis C virus using RNA aptamers that specifically bind to HCV core antigen Biochemical and Biophysical Research Communications. ,vol. 358, pp. 47- 52 ,(2007) , 10.1016/J.BBRC.2007.04.057
H. Shi, X. Fan, A. Sevilimedu, J. T. Lis, RNA aptamers directed to discrete functional sites on a single protein structural domain Proceedings of the National Academy of Sciences of the United States of America. ,vol. 104, pp. 3742- 3746 ,(2007) , 10.1073/PNAS.0607805104
Claudia Sheedy, C. Roger MacKenzie, J. Christopher Hall, Isolation and affinity maturation of hapten-specific antibodies. Biotechnology Advances. ,vol. 25, pp. 333- 352 ,(2007) , 10.1016/J.BIOTECHADV.2007.02.003
R. Jenison, S. Gill, A Pardi, B Polisky, High-resolution molecular discrimination by RNA Science. ,vol. 263, pp. 1425- 1429 ,(1994) , 10.1126/SCIENCE.7510417
Hideki Fukata, Hidenori Miyagawa, Noriko Yamazaki, Chisato Mori, Comparison of Elisa- and LC-MS-Based Methodologies for the Exposure Assessment of Bisphenol A Toxicology Mechanisms and Methods. ,vol. 16, pp. 427- 430 ,(2006) , 10.1080/15376520600697404
Ketai Guo, Hans P. Wendel, Lutz Scheideler, Gerhard Ziemer, Albertus M. Scheule, Aptamer-based capture molecules as a novel coating strategy to promote cell adhesion. Journal of Cellular and Molecular Medicine. ,vol. 9, pp. 731- 736 ,(2005) , 10.1111/J.1582-4934.2005.TB00503.X
Javed H. Niazi, Su Jin Lee, Yeon Seok Kim, Man Bock Gu, ssDNA aptamers that selectively bind oxytetracycline Bioorganic & Medicinal Chemistry. ,vol. 16, pp. 1254- 1261 ,(2008) , 10.1016/J.BMC.2007.10.073
Seung-min Park, Ji-Young Ahn, Minjoung Jo, Dong-ki Lee, John T. Lis, Harold G. Craighead, Soyoun Kim, Selection and elution of aptamers using nanoporous sol-gel arrays with integrated microheaters Lab on a Chip. ,vol. 9, pp. 1206- 1212 ,(2009) , 10.1039/B814993C