Structure and reactivity of phosphate diesters. Dependence on the nonleaving group

作者: Anthony J Kirby , Bruno S Souza , Faruk Nome , None

DOI: 10.1139/CJC-2014-0358

关键词: PhosphateMoleculeChemistryLower temperatureOrganic chemistryMedicinal chemistryHydrolysisBond lengthLeaving group

摘要: The hydrolytic reactivity of simple phosphate diesters with very good leaving groups is known to be practically independent the nonleaving group at 100 °C. Calculations on (too slow measure) hydrolysis 25 °C a series p-nitrophenyl ROPO2––OpNP wide range OR indicate small but significant effect lower temperature, making R = methyl ester most reactive. This in opposite sense much larger observed for reactions triesters and consistent reaction driven primarily by departure. calculations use continuum model up four discrete water molecules: two or three waters give best results.

参考文章(17)
Perry A. Frey, Adrian D. Hegeman, Enzymatic Reaction Mechanisms Oxford University Press. ,(2007) , 10.1093/OSO/9780195122589.001.0001
Suzanne J. Admiraal, Daniel Herschlag, The Substrate-Assisted General Base Catalysis Model for Phosphate Monoester Hydrolysis: Evaluation Using Reactivity Comparisons Journal of the American Chemical Society. ,vol. 122, pp. 2145- 2148 ,(2000) , 10.1021/JA993942G
Shina C. L. Kamerlin, Pankaz K. Sharma, Ram B. Prasad, Arieh Warshel, Why nature really chose phosphate. Quarterly Reviews of Biophysics. ,vol. 46, pp. 1- 132 ,(2013) , 10.1017/S0033583512000157
Kenichi Fukui, The path of chemical reactions - the IRC approach Accounts of Chemical Research. ,vol. 14, pp. 363- 368 ,(1981) , 10.1021/AR00072A001
Alexandra T. P. Carvalho, AnnMarie C. O'Donoghue, David R. W. Hodgson, Shina C. L. Kamerlin, Understanding thio-effects in simple phosphoryl systems: role of solvent effects and nucleophile charge Organic and Biomolecular Chemistry. ,vol. 13, pp. 5391- 5398 ,(2015) , 10.1039/C5OB00309A
Aleksandr V. Marenich, Christopher J. Cramer, Donald G. Truhlar, Universal solvation model based on solute electron density and on a continuum model of the solvent defined by the bulk dielectric constant and atomic surface tensions. Journal of Physical Chemistry B. ,vol. 113, pp. 6378- 6396 ,(2009) , 10.1021/JP810292N
Kazunari Taira, Tahsin Fanni, David G. Gorenstein, Stereoelectronic effects in the hydrolysis of ethyl and methyl ethylene phosphates Journal of Organic Chemistry. ,vol. 49, pp. 4531- 4536 ,(1984) , 10.1021/JO00197A041