Pericentric satellite DNA and molecular phylogeny in Acomys (Rodentia).
作者： Barbel Kunze , Walther Traut , Silvia Garagna , Dieter Weichenhan , Carlo A. Redi
关键词: Genetics 、 Molecular phylogenetics 、 Centromere 、 Biology 、 Autosome 、 Centromere protein B 、 Satellite DNA 、 Russatus 、 Genome 、 Taxonomy (biology)
摘要: Satellite DNAs (stDNAs) of four Acomys species (spiny-mice), A. cahirinus, cineraceus, dimidiatus and russatus, belong to closely related sequence families. Monomer sizes range from 338 364 bp. Between-species identity was 81.0% 97.2%. The molecular phylogeny the sequences helps clarify taxonomy this ‘difficult’ group. genome contains about 60 000 repeats. According restriction patterns, repeats are arranged in tandem. stDNA maps centromeric heterochromatin most autosomes, both acrocentric metacentric, but appears be absent region Y chromosomes. A well-conserved centromere protein B (CENP-B) box is present russatus while it degenerated other species.
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sci-hub.se 参考文章(30)
Dieter Weichenhan, Bärbel Kunze, Stefan Zacker, Walther Traut, Heinz Winking, Structure and expression of the murine Sp100 nuclear dot gene Genomics. ,vol. 43, pp. 298- 306 ,(1997) , 10.1006/GENO.1997.4834
H. Masumoto, K. Yoda, M. Ikeno, K. Kitagawa, Y. Muro, T. Okazaki, Properties of CENP-B and Its Target Sequence in a Satellite DNA Chromosome Segregation and Aneuploidy. pp. 31- 43 ,(1993) , 10.1007/978-3-642-84938-1_3
Bernard John, George L. Gabor Miklos, Functional Aspects of Satellite DNA and Heterochromatin International Review of Cytology. ,vol. 58, pp. 1- 114 ,(1979) , 10.1016/S0074-7696(08)61473-4
D Kipling, Centromeres, CENP-B and Tigger too. Trends in Genetics. ,vol. 13, pp. 141- 145 ,(1997) , 10.1016/S0168-9525(97)01098-6
A. Lima-de-Faria, U. Arnason, B. Widegren, J. Essen-Möller, M. Isaksson, E. Olsson, H. Jaworska, Conservation of repetitive DNA sequences in deer species studied by Southern blot transfer Journal of Molecular Evolution. ,vol. 20, pp. 17- 24 ,(1984) , 10.1007/BF02101981
Thomas Haaf, A. Gregory Mater, Johannes Wienberg, David C. Ward, Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific alpha-satellite DNA. Journal of Molecular Evolution. ,vol. 41, pp. 487- 491 ,(1995) , 10.1007/BF00160320
V. Volobouev, J. -C. Gautun, B. Sicard, M. Tranier, The chromosome complement of Acomys spp. (Rodentia, Muridae) from Oursi, Burkina Faso--the ancestral karyotype of the cahirinus-dimidiatus group? Chromosome Research. ,vol. 4, pp. 526- 530 ,(1996) , 10.1007/BF02261780
Christoph Plass, Dieter Weichenhan, Bärbel Kunze, Thomas Hell Wig, Carsten Schneider, Friedlinde A. Bautz, Karl-Heinz Grzeschik, Walther Traut, Heinz Winking, A Member of the Mouse LRR Transcript Family with Homology to the Human Sp100 Gene Hereditas. ,vol. 122, pp. 245- 256 ,(2004) , 10.1111/J.1601-5223.1995.00245.X
C. A. Redi, S. Garagna, G. Della Valle, G. Bottiroli, P. Dell'Orto, G. Viale, F. A. Peverali, E. Raimondi, J. Forejt, Differences in the organization and chromosomal allocation of satellite DNA between the European long tailed house mice Mus domesticus and Mus musculus. Chromosoma. ,vol. 99, pp. 11- 17 ,(1990) , 10.1007/BF01737284
Wolfram Hörz, Werner Altenburger, Nucleotide sequence of mouse satellite DNA. Nucleic Acids Research. ,vol. 9, pp. 683- 696 ,(1981) , 10.1093/NAR/9.3.683