Properties and Crystal Structure of a -Barrel Folding Mutant

作者: Ira J. Ropson , Brian C. Yowler , Leonard Banaszak , Paula M. Dalessio , James Thompson

DOI:

关键词: Accessible surface areaFluorescenceProtein secondary structureMutantMutant proteinCrystallographyHydrogen bondFolding (chemistry)Denaturation (biochemistry)Chemistry

摘要: A mutant of a -barrel protein, rat intestinal fatty acid binding was predicted to be more stable than the wild-type protein due novel hydrogen bond. Equilibrium denaturation studies indicated opposite: V60N less stable. The folding transitions followed by CD and fluorescence were reversible two-state for both protein. However, rates renaturation faster. During unfolding, initial rate associated with 75- 80% all amplitude change. subsequent accounted remaining change proteins; thus intermediate state lacked secondary structure. folding, one detected after an burst phase mutant. An additional slower structure has been obtained is nearly identical prior crystal structures IFABP. Analysis mean differences in bond van der Waals interactions did not readily account stability loss mutation. significant average solvent accessible surface crystallographic displacement factors suggest entropic destabilization.

参考文章(25)
Leonard Banaszak, Nathan Winter, Zhaohui Xu, David A. Bernlohr, Sandra Cowan, Alwyn T. Jones, Lipid-Binding Proteins: A Family of Fatty Acid and Retinoid Transport Proteins Advances in Protein Chemistry. ,vol. 45, pp. 89- 151 ,(1994) , 10.1016/S0065-3233(08)60639-7
Harvey J. Motulsky, Lennart A. Ransnas, Fitting curves to data using nonlinear regression: a practical and nonmathematical review. The FASEB Journal. ,vol. 1, pp. 365- 374 ,(1987) , 10.1096/FASEBJ.1.5.3315805
J I Gordon, D H Alpers, R K Ockner, A W Strauss, The nucleotide sequence of rat liver fatty acid binding protein mRNA. Journal of Biological Chemistry. ,vol. 258, pp. 3356- 3363 ,(1983) , 10.1016/S0021-9258(18)32868-0
I Gantz, S.F. Nothwehr, M Lucey, J.C. Sacchettini, J DelValle, L.J. Banaszak, M Naud, J.I. Gordon, T Yamada, Gastrotropin: not an enterooxyntin but a member of a family of cytoplasmic hydrophobic ligand binding proteins. Journal of Biological Chemistry. ,vol. 264, pp. 20248- 20254 ,(1989) , 10.1016/S0021-9258(19)47054-3
James C. Sacchettini, Jeffrey I. Gordon, Leonard J. Banaszak, Crystal structure of rat intestinal fatty-acid-binding protein. Refinement and analysis of the Escherichia coli-derived protein with bound palmitate. Journal of Molecular Biology. ,vol. 208, pp. 327- 339 ,(1989) , 10.1016/0022-2836(89)90392-6
Ira J. Ropson, Jeffrey I. Gordon, Carl Frieden, Folding of a predominantly β-structure protein : rat intestinal fatty acid binding protein Biochemistry. ,vol. 29, pp. 9591- 9599 ,(1990) , 10.1021/BI00493A013
Axel T Brünger, Paul D Adams, G Marius Clore, Warren L DeLano, Piet Gros, Ralf W Grosse-Kunstleve, J-S Jiang, John Kuszewski, Michael Nilges, Navraj S Pannu, Randy J Read, Luke M Rice, Thomas Simonson, Gregory L Warren, Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination Acta Crystallographica Section D-biological Crystallography. ,vol. 54, pp. 905- 921 ,(1998) , 10.1107/S0907444998003254