A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

作者: Katherine W Jordan , Shichen Wang , Yanni Lun , Laura-Jayne Gardiner , Ron MacLachlan

DOI: 10.1186/S13059-015-0606-4

关键词: GeneticsDirectional selectionSingle-nucleotide polymorphismSelection (genetic algorithm)Allele frequencyGenomeNegative selectionIndelHaplotypeBiology

摘要: … sites we found that 1,505,400 SNPs had genotype calls for cultivar Chinese Spring and 16,736 of these genotype calls … genotype call for Chinese Spring. The rare variant (MAF ≤1.6%) …

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