Accessing the SEED Genome Databases via Web Services API: Tools for Programmers
作者： Terry Disz , Sajia Akhter , Daniel Cuevas , Robert Olson , Ross Overbeek
关键词: DNA microarray 、 Database 、 Vertebrate and Genome Annotation Project 、 Genome 、 Web service 、 World Wide Web 、 Metagenomics 、 Computer science 、 Genome project 、 Microbial Genomes 、 Cluster analysis
摘要: Background The SEED integrates many publicly available genome sequences into a single resource. The database contains accurate and up-to-date annotations based on the subsystems concept that leverages clustering between genomes other clues to accurately efficiently annotate microbial genomes. backend is used as foundation for annotation tools, such Rapid Annotation using Subsystems Technology (RAST) server whole annotation, metagenomics RAST random community annotations, clearinghouse exchanging from different resources. In addition web user interface, also provides Web services API programmatic access data in SEED, allowing development of third-party tools mash-ups.
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