Typing short amplicon binary polymorphisms: Supplementary SNP and Indel genetic information in the analysis of highly degraded skeletal remains

作者: C. Romanini , M.L. Catelli , A. Borosky , R. Pereira , M. Romero

DOI: 10.1016/J.FSIGEN.2011.10.006

关键词: GenotypingGenetic markerSTR multiplex systemTypingAmpliconBiologyIndelGeneticsSingle-nucleotide polymorphismINDEL Mutation

摘要: … Statistical analysis for the 50 SNPs and 38 Indels was based on a sample of 30 unrelated … all genetic markers analyzed in this study (SNPs, InDels, STRs) was computed using Arlequin …

参考文章(32)
J V Planz, B Budowle, R S Campbell, A J Eisenberg, Single Nucleotide Polymorphisms and Microarray Technology in Forensic Genetics - Development and Application to Mitochondrial DNA. Forensic science review. ,vol. 16, pp. 21- 36 ,(2004)
Hiroyuki Ohtaki, Toshimichi Yamamoto, Takashi Yoshimoto, Rieko Uchihi, Chiaki Ooshima, Yoshinao Katsumata, Katsushi Tokunaga, A powerful, novel, multiplex typing system for six short tandem repeat loci and the allele frequency distributions in two Japanese regional populations. Electrophoresis. ,vol. 23, pp. 3332- 3340 ,(2002) , 10.1002/1522-2683(200210)23:19<3332::AID-ELPS3332>3.0.CO;2-8
Denise T Chung, Jirı Drábek, Kerry L Opel, John M Butler, Bruce R McCord, A study on the effects of degradation and template concentration on the amplification efficiency of the STR Miniplex primer sets. Journal of Forensic Sciences. ,vol. 49, pp. 733- 740 ,(2004) , 10.1520/JFS2003269
Michael D. Coble, John M. Butler, Characterization of new miniSTR loci to aid analysis of degraded DNA. Journal of Forensic Sciences. ,vol. 50, pp. 43- 53 ,(2005) , 10.1520/JFS2004216
M. Fondevila, C. Phillips, N. Naverán, M. Cerezo, A. Rodríguez, R. Calvo, L.M. Fernández, Á. Carracedo, M.V. Lareu, Challenging DNA: Assessment of a range of genotyping approaches for highly degraded forensic samples Forensic Science International: Genetics Supplement Series. ,vol. 1, pp. 26- 28 ,(2008) , 10.1016/J.FSIGSS.2007.10.057
P. Wiegand, M. Kleiber, Less is more--length reduction of STR amplicons using redesigned primers. International Journal of Legal Medicine. ,vol. 114, pp. 285- 287 ,(2001) , 10.1007/S004140000162
Jirı Drábek, Denise T Chung, John M Butler, Bruce R McCord, Concordance Study Between Miniplex Assays and a Commercial STR Typing Kit Journal of Forensic Sciences. ,vol. 49, pp. 1- 2 ,(2004) , 10.1520/JFS2004032
Peter Gill, Jonathan Whitaker, Christine Flaxman, Nick Brown, John Buckleton, An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA. Forensic Science International. ,vol. 112, pp. 17- 40 ,(2000) , 10.1016/S0379-0738(00)00158-4
Walter Bär, Adelgunde Kratzer, Marco Mächler, Werner Schmid, Postmortem stability of DNA Forensic Science International. ,vol. 39, pp. 59- 70 ,(1988) , 10.1016/0379-0738(88)90118-1