Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea, China
作者： Caiyun Yang , Yi Li , Benjamin Zhou , Yanyan Zhou , Wei Zheng
DOI: 10.1038/SREP08476
关键词: Ecology 、 Illumina dye sequencing 、 Marine ecosystem 、 Bacteria 、 Dissolved organic carbon 、 Community structure 、 Bloom 、 Phytoplankton 、 Biology 、 Eutrophication
摘要: Although phytoplankton are the major source of marine dissolved organic matter (DOM), their blooms a global problem that can greatly affect ecological systems, especially free-living bacteria, which primary DOM degraders. In this study, we analyzed bacterial communities from Xiamen sea during an Akashiwo sanguine bloom using Illumina MiSeq sequencing 16S rRNA gene amplicons. The was probably stimulated by low salinity and ended after abatement eutrophication pollution. A total 658,446 sequence reads 11,807 OTUs were obtained in both control samples with Alpha-proteobacteria Gamma-proteobacteria being predominant classes detected. decreased diversity, increased species evenness, significantly changed community structure. Bacterial within more homogeneous than those area. bacteria included SAR86 SAR116 clades AEGEAN-169 group, but few suppressed. addition, many known to be associated detected only samples. This study revealed great influence A. sanguinea on communities, provided new insights into relationship between ecosystems.
harvard.edu
nature.com
sci-hub.se 参考文章(87)
Markus Karner, Gerhard J. Herndl, Extracellular enzymatic activity and secondary production in free-living and marine-snow-associated bacteria Marine Biology. ,vol. 113, pp. 341- 347 ,(1992) , 10.1007/BF00347289
Hans Paerl, Nutrient and other environmental controls of harmful cyanobacterial blooms along the freshwater–marine continuum Advances in Experimental Medicine and Biology. ,vol. 619, pp. 217- 237 ,(2008) , 10.1007/978-0-387-75865-7_10
Nan Li, Lei Zhang, Fuchao Li, Yuezhu Wang, Yongqiang Zhu, Hui Kang, Shengyue Wang, Song Qin, Metagenome of microorganisms associated with the toxic Cyanobacteria Microcystis aeruginosa analyzed using the 454 sequencing platform Chinese Journal of Oceanology and Limnology. ,vol. 29, pp. 505- 513 ,(2011) , 10.1007/S00343-011-0056-0
Johanna M. Rinta-Kanto, Shulei Sun, Shalabh Sharma, Ronald P. Kiene, Mary Ann Moran, Bacterial community transcription patterns during a marine phytoplankton bloom. Environmental Microbiology. ,vol. 14, pp. 228- 239 ,(2012) , 10.1111/J.1462-2920.2011.02602.X
Johanna M. Rinta-Kanto, Helmut Bürgmann, Scott M. Gifford, Shulei Sun, Shalabh Sharma, Daniela A. del Valle, Ronald P. Kiene, Mary Ann Moran, Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray Environmental Microbiology. ,vol. 13, pp. 453- 467 ,(2011) , 10.1111/J.1462-2920.2010.02350.X
G. E. Fogg, The Ecological Significance of Extracellular Products of Phytoplankton Photosynthesis Botanica Marina. ,vol. 26, pp. 3- 14 ,(1983) , 10.1515/BOTM.1983.26.1.3
J.N. Rooney-Varga, M.W. Giewat, M.C. Savin, S. Sood, M. LeGresley, J.L. Martin, Links between Phytoplankton and Bacterial Community Dynamics in a Coastal Marine Environment Microbial Ecology. ,vol. 49, pp. 163- 175 ,(2005) , 10.1007/S00248-003-1057-0
R. Zarnowski, A. Felske, R.J. Ellis, J.M.C. Geuns, S.J. Pietr, A Methylobacterium-like organism from algal crusts covering silicone rubber electric insulators in Africa Journal of Applied Microbiology. ,vol. 93, pp. 1012- 1019 ,(2002) , 10.1046/J.1365-2672.2002.01781.X
Xiuning Du, William Peterson, Anita McCulloch, Guangxing Liu, An unusual bloom of the dinoflagellate Akashiwo sanguinea off the central Oregon, USA, coast in autumn 2009 Harmful Algae. ,vol. 10, pp. 784- 793 ,(2011) , 10.1016/J.HAL.2011.06.011
S. Z. Qasim, P. M. A. Bhattathiri, V. P. Devassy, The influence of salinity on the rate of photosynthesis and abundance of some tropical phytoplankton Marine Biology. ,vol. 12, pp. 200- 206 ,(1972) , 10.1007/BF00346767