Development of standardized approaches to reporting of minimal residual disease data using a reporting software package designed within the European LeukemiaNet.

作者: M Østergaard , C G Nyvold , J V Jovanovic , M T Andersen , V Kairisto

DOI: 10.1038/LEU.2011.69

关键词: MedicineComputational biologyMinimal residual diseaseMyeloid leukemiaSoftwareBioinformaticsSoftware packageIn patientClinical trialInternational scaleEuropean LeukemiaNet

摘要: Quantitative PCR (qPCR) for detection of fusion transcripts and overexpressed genes is a promising tool following minimal residual disease (MRD) in patients with hematological malignancies. Its widespread clinical use has to some extent been hampered by differences data analysis presentation that complicate multicenter trials. To address these issues, we designed highly flexible MRD-reporting software program, which from various qPCR platforms can be imported, processed, presented uniform manner generate intuitively understandable reports. The was tested two-step quality control (QC) study; the first step involved eight centers, whose previous experience ranged none extensive. participants received cDNA consecutive samples BCR-ABL+ chronic myeloid leukemia (CML) patient an acute (AML) both CBFβ-MYH11 WT1 target genes, they conducted on their respective hardware generated series reports pre-defined features. In two, five centers used report MRD harmonized manner, applying recently obtained CML international scale conversion factors. QC study demonstrated this suitable efficient handling data, generation harmonization data.

参考文章(16)
W-C Chou, J-L Tang, S-J Wu, W Tsay, M Yao, S-Y Huang, K-C Huang, C-Y Chen, C-F Huang, H-F Tien, Clinical implications of minimal residual disease monitoring by quantitative polymerase chain reaction in acute myeloid leukemia patients bearing nucleophosmin (NPM1) mutations. Leukemia. ,vol. 21, pp. 998- 1004 ,(2007) , 10.1038/SJ.LEU.2404637
Susanne Schnittger, Wolfgang Kern, Claudia Tschulik, Tamara Weiss, Frank Dicker, Brunangelo Falini, Claudia Haferlach, Torsten Haferlach, Minimal residual disease levels assessed by NPM1 mutation–specific RQ-PCR provide important prognostic information in AML Blood. ,vol. 114, pp. 2220- 2231 ,(2009) , 10.1182/BLOOD-2009-03-213389
Richard D. Press, Stephanie G. Willis, Jennifer Laudadio, Michael J. Mauro, Michael W. N. Deininger, Determining the rise in BCR-ABL RNA that optimally predicts a kinase domain mutation in patients with chronic myeloid leukemia on imatinib. Blood. ,vol. 114, pp. 2598- 2605 ,(2009) , 10.1182/BLOOD-2008-08-173674
Sylvie D. Freeman, Jelena V. Jovanovic, David Grimwade, Development of minimal residual disease-directed therapy in acute myeloid leukemia. Seminars in Oncology. ,vol. 35, pp. 388- 400 ,(2008) , 10.1053/J.SEMINONCOL.2008.04.009
J J M van Dongen, A W Langerak, M Brüggemann, P A S Evans, M Hummel, F L Lavender, E Delabesse, F Davi, E Schuuring, R García-Sanz, J H J M van Krieken, J Droese, D González, C Bastard, H E White, M Spaargaren, M González, A Parreira, J L Smith, G J Morgan, M Kneba, E A Macintyre, Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: report of the BIOMED-2 Concerted Action BMH4-CT98-3936. Leukemia. ,vol. 17, pp. 2257- 2317 ,(2003) , 10.1038/SJ.LEU.2403202
V H J van der Velden, , N Boeckx, M Gonzalez, M Malec, G Barbany, T Lion, E Gottardi, N Pallisgaard, E Beillard, W C J Hop, P G Hoogeveen, J Gabert, J J M van Dongen, Differential stability of control gene and fusion gene transcripts over time may hamper accurate quantification of minimal residual disease--a study within the Europe Against Cancer Program. Leukemia. ,vol. 18, pp. 884- 886 ,(2004) , 10.1038/SJ.LEU.2403309
J Gabert, E Beillard, V H J van der Velden, W Bi, D Grimwade, N Pallisgaard, G Barbany, G Cazzaniga, J M Cayuela, H Cavé, F Pane, J L E Aerts, D De Micheli, X Thirion, V Pradel, M González, S Viehmann, M Malec, G Saglio, J J M van Dongen, Standardization and quality control studies of ‘real-time’ quantitative reverse transcriptase polymerase chain reaction of fusion gene transcripts for residual disease detection in leukemia – A Europe Against Cancer Program Leukemia. ,vol. 17, pp. 2318- 2357 ,(2003) , 10.1038/SJ.LEU.2403135
M C Müller, N C P Cross, P Erben, T Schenk, B Hanfstein, T Ernst, R Hehlmann, S Branford, G Saglio, A Hochhaus, Harmonization of molecular monitoring of CML therapy in Europe. Leukemia. ,vol. 23, pp. 1957- 1963 ,(2009) , 10.1038/LEU.2009.168
V H J van der Velden, A Hochhaus, G Cazzaniga, T Szczepanski, J Gabert, J J M van Dongen, Detection of minimal residual disease in hematologic malignancies by real-time quantitative PCR: principles, approaches, and laboratory aspects. Leukemia. ,vol. 17, pp. 1013- 1034 ,(2003) , 10.1038/SJ.LEU.2402922
David K. H. Webb, Management of relapsed acute myeloid leukaemia. British Journal of Haematology. ,vol. 106, pp. 851- 859 ,(1999) , 10.1046/J.1365-2141.1999.01629.X