Heterosexual Transmission of Subtype C HIV-1 Selects Consensus-Like Variants without Increased Replicative Capacity or Interferon-α Resistance.

作者: Martin J. Deymier , Zachary Ende , Angharad E. Fenton-May , Dario A. Dilernia , William Kilembe

DOI: 10.1371/JOURNAL.PPAT.1005154

关键词: Transmission (mechanics)Peripheral blood mononuclear cellImmune systemInfectivityAlpha interferonAntibodyViral replicationBiologyVirologyGeneticsViral quasispecies

摘要: Heterosexual transmission of HIV-1 is characterized by a genetic bottleneck that selects single viral variant, the transmitted/founder (TF), during most events. To assess characteristics influencing transmission, we sequenced 167 near full-length genomes and generated 40 infectious molecular clones (IMC) including TF variants multiple non-transmitted (NT) subtype C from six linked heterosexual pairs time transmission. Consensus-like sensitive to donor antibodies were selected for in these pairs. However, did not demonstrate increased fitness terms particle infectivity or replicative capacity activated peripheral blood mononuclear cells (PBMC) monocyte-derived dendritic (MDDC). In addition, resistance variant antiviral effects interferon-α (IFN-α) was significantly different same pair. Thus neither vitro nor IFN-α discriminated potential viruses quasispecies chronically infected individuals. our findings support hypothesis within-host evolution response adaptive immune responses reduces potential.

参考文章(54)
Simone I Richardson, Elin S Gray, Nonhlanhla N Mkhize, Daniel J Sheward, Bronwen E Lambson, Constantinos Kurt Wibmer, Lindi Masson, Lise Werner, Nigel Garrett, Jo-Ann S Passmore, Quarraisha Abdool Karim, Salim S Abdool Karim, Carolyn Williamson, Penny L Moore, Lynn Morris, South African HIV-1 subtype C transmitted variants with a specific V2 motif show higher dependence on α4β7 for replication. Retrovirology. ,vol. 12, pp. 54- 54 ,(2015) , 10.1186/S12977-015-0183-3
Dario A. Dilernia, Jung-Ting Chien, Daniela C. Monaco, Michael P.S. Brown, Zachary Ende, Martin J. Deymier, Ling Yue, Ellen E. Paxinos, Susan Allen, Alfredo Tirado-Ramos, Eric Hunter, Multiplexed highly-accurate DNA sequencing of closely-related HIV-1 variants using continuous long reads from single molecule, real-time sequencing Nucleic Acids Research. ,vol. 43, ,(2015) , 10.1093/NAR/GKV630
Yi Liu, Marcel E. Curlin, Kurt Diem, Hong Zhao, Ananta K. Ghosh, Haiying Zhu, Amanda S. Woodward, Janine Maenza, Claire E. Stevens, Joanne Stekler, Ann C. Collier, Indira Genowati, Wenjie Deng, Rafael Zioni, Lawrence Corey, Tuofu Zhu, James I. Mullins, Env length and N-linked glycosylation following transmission of human immunodeficiency virus Type 1 subtype B viruses. Virology. ,vol. 374, pp. 229- 233 ,(2008) , 10.1016/J.VIROL.2008.01.029
C. Ochsenbauer, T. G. Edmonds, H. Ding, B. F. Keele, J. Decker, M. G. Salazar, J. F. Salazar-Gonzalez, R. Shattock, B. F. Haynes, G. M. Shaw, B. H. Hahn, J. C. Kappes, Generation of Transmitted/Founder HIV-1 Infectious Molecular Clones and Characterization of their Replication Capacity in CD4 T-Lymphocytes and Monocyte-derived Macrophages Journal of Virology. ,vol. 86, pp. 2715- 2728 ,(2012) , 10.1128/JVI.06157-11
Rodney E. Phillips, Sarah Rowland-Jones, Douglas F. Nixon, Frances M. Gotch, Jon P. Edwards, Afolabi O. Ogunlesi, John G. Elvin, Jonathan A. Rothbard, Charles R. M. Bangham, Charles R. Rizza, Andrew J. McMichael, Human immunodeficiency virus genetic variation that can escape cytotoxic T cell recognition. Nature. ,vol. 354, pp. 453- 459 ,(1991) , 10.1038/354453A0
Xiping Wei, Julie M Decker, Shuyi Wang, Huxiong Hui, John C Kappes, Xiaoyun Wu, Jesus F Salazar-Gonzalez, Maria G Salazar, J Michael Kilby, Michael S Saag, Natalia L Komarova, Martin A Nowak, Beatrice H Hahn, Peter D Kwong, George M Shaw, None, Antibody neutralization and escape by HIV-1 Nature. ,vol. 422, pp. 307- 312 ,(2003) , 10.1038/NATURE01470
Ling Yue, Katja J. Pfafferott, Joshua Baalwa, Karen Conrod, Catherine C. Dong, Cecilia Chui, Rong Rong, Daniel T. Claiborne, Jessica L. Prince, Jianming Tang, Ruy M. Ribeiro, Emmanuel Cormier, Beatrice H. Hahn, Alan S. Perelson, George M. Shaw, Etienne Karita, Jill Gilmour, Paul Goepfert, Cynthia A. Derdeyn, Susan A. Allen, Persephone Borrow, Eric Hunter, Transmitted Virus Fitness and Host T Cell Responses Collectively Define Divergent Infection Outcomes in Two HIV-1 Recipients PLoS Pathogens. ,vol. 11, pp. e1004565- ,(2015) , 10.1371/JOURNAL.PPAT.1004565
B. F. Keele, E. E. Giorgi, J. F. Salazar-Gonzalez, J. M. Decker, K. T. Pham, M. G. Salazar, C. Sun, T. Grayson, S. Wang, H. Li, X. Wei, C. Jiang, J. L. Kirchherr, F. Gao, J. A. Anderson, L.-H. Ping, R. Swanstrom, G. D. Tomaras, W. A. Blattner, P. A. Goepfert, J. M. Kilby, M. S. Saag, E. L. Delwart, M. P. Busch, M. S. Cohen, D. C. Montefiori, B. F. Haynes, B. Gaschen, G. S. Athreya, H. Y. Lee, N. Wood, C. Seoighe, A. S. Perelson, T. Bhattacharya, B. T. Korber, B. H. Hahn, G. M. Shaw, Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection Proceedings of the National Academy of Sciences of the United States of America. ,vol. 105, pp. 7552- 7557 ,(2008) , 10.1073/PNAS.0802203105
N. F. Parrish, F. Gao, H. Li, E. E. Giorgi, H. J. Barbian, E. H. Parrish, L. Zajic, S. S. Iyer, J. M. Decker, A. Kumar, B. Hora, A. Berg, F. Cai, J. Hopper, T. N. Denny, H. Ding, C. Ochsenbauer, J. C. Kappes, R. P. Galimidi, A. P. West, P. J. Bjorkman, C. B. Wilen, R. W. Doms, M. O'Brien, N. Bhardwaj, P. Borrow, B. F. Haynes, M. Muldoon, J. P. Theiler, B. Korber, G. M. Shaw, B. H. Hahn, Phenotypic properties of transmitted founder HIV-1 Proceedings of the National Academy of Sciences of the United States of America. ,vol. 110, pp. 6626- 6633 ,(2013) , 10.1073/PNAS.1304288110