Nanoprobes for Live-Cell Gene Detection

作者: Gang Bao , Won Jong Rhee , Andrew Tsourkas

DOI: 10.1007/978-1-4419-0040-1_14

关键词: Gene expressionMolecular beaconOligomer restrictionOligonucleotideRNADNA microarrayGeneBiologyFluorescence in situ hybridizationComputational biology

摘要: The ability to visualize in real time the expression dynamics and localization of specific RNAs vivo offers tremendous opportunities for biological disease studies including cancer detection. However, quantitative methods such as real-time polymerase chain reaction (PCR) DNA microarrays rely on use cell lysates thus not able obtain important spatial temporal information. Fluorescence proteins other reporter systems cannot image endogenous RNA living cells. situ hybridization (FISH) assays require washing achieve specificity, therefore can only be used with fixed Here we review recent development nanostructured probes detection discuss engineering issues challenges quantifying gene vivo. In particular, describe that oligonucleotide probes, combined novel delivery strategies, relative level, localization, live Examples detecting messenger RNAs, well imaging their subcellular are given illustrate applications, probe design, delivery, target accessibility discussed. promise open new exciting sensitive a wide range medical applications.

参考文章(70)
Altieri Dc, Marchisio Pc, Survivin apoptosis: an interloper between cell death and cell proliferation in cancer. Laboratory Investigation. ,vol. 79, pp. 1327- 1333 ,(1999)
L. G. Kostrikis, MOLECULAR BEACONS: Spectral Genotyping of Human Alleles Science. ,vol. 279, pp. 1228- 1229 ,(1998) , 10.1126/SCIENCE.279.5354.1228
Snyder El, Dowdy Sf, Protein/peptide transduction domains: potential to deliver large DNA molecules into cells. Current Opinion in Molecular Therapeutics. ,vol. 3, pp. 147- ,(2001)
T Minamoto, Z Ronai, M Mai, K-ras mutation: early detection in molecular diagnosis and risk assessment of colorectal, pancreas, and lung cancers--a review. Cancer Detection and Prevention. ,vol. 24, pp. 1- 12 ,(2000)
James C Alwine, David J Kemp, Barbara A Parker, Jakob Reiser, Jaime Renart, George R Stark, Geoffrey M Wahl, None, [15] Detection of specific RNAs or specific fragments of DNA by fractionation in gels and transfer to diazobenzyloxymethyl paper Methods in Enzymology. ,vol. 68, pp. 220- 242 ,(1979) , 10.1016/0076-6879(79)68017-5
Sanjay Tyagi, Salvatore A.E. Marras, Fred Russell Kramer, Wavelength-shifting molecular beacons Nature Biotechnology. ,vol. 18, pp. 1191- 1196 ,(2000) , 10.1038/81192
Frank J. Steemers, Jane A. Ferguson, David R. Walt, Screening unlabeled DNA targets with randomly ordered fiber-optic gene arrays. Nature Biotechnology. ,vol. 18, pp. 91- 94 ,(2000) , 10.1038/72006
Takeaki Ozawa, Yutaka Natori, Moritoshi Sato, Yoshio Umezawa, Imaging dynamics of endogenous mitochondrial RNA in single living cells. Nature Methods. ,vol. 4, pp. 413- 419 ,(2007) , 10.1038/NMETH1030
Andrew Tsourkas, Mark A. Behlke, Yangqing Xu, Gang Bao, Spectroscopic features of dual fluorescence/luminescence resonance energy-transfer molecular beacons. Analytical Chemistry. ,vol. 75, pp. 3697- 3703 ,(2003) , 10.1021/AC034295L