On the fidelity of DNA replication. Lack of primer position effect on the fidelity of mammalian DNA polymerases.

作者: J Abbotts , L A Loeb

DOI: 10.1016/S0021-9258(17)39786-7

关键词: Position effectPrimer (molecular biology)DNA polymeraseGeneticsDNAProofreadingDNA replicationFidelityProcessivityBiology

摘要: Abstract Mechanisms for the fidelity of DNA replication in eucaryotes are not adequately understood. Certain hypotheses can be tested by examining whether first nucleotide inserted is incorporated with a significantly higher error rate than subsequent nucleotides. Using synthetic oligodeoxynucleotides, we have measured effect primer position on single-base misinsertion frequencies at an amber site phi X174 DNA. Our results show lack effect, indicating that processivity and most direct "energy relay" proofreading mechanisms important determinants eucaryotic fidelity.

参考文章(18)
F. Grosse, G. Krauss, J.W. Knill-Jones, A.R. Fersht, Accuracy of DNA polymerase-alpha in copying natural DNA. The EMBO Journal. ,vol. 2, pp. 1515- 1519 ,(1983) , 10.1002/J.1460-2075.1983.TB01616.X
Narayana Battula, Lawrence A. Loeb, The Infidelity of Avian Myeloblastosis Virus Deoxyribonucleic Acid Polymerase in Polynucleotide Replication Journal of Biological Chemistry. ,vol. 249, pp. 4086- 4093 ,(1974) , 10.1016/S0021-9258(19)42486-1
T.A. Kunkel, R.M. Schaaper, R.A. Beckman, L.A. Loeb, On the fidelity of DNA replication. Effect of the next nucleotide on proofreading. Journal of Biological Chemistry. ,vol. 256, pp. 9883- 9889 ,(1981) , 10.1016/S0021-9258(19)68712-0
R.A. Bambara, D. Uyemura, T. Choi, On the processive mechanism of Escherichia coli DNA polymerase I. Quantitative assessment of processivity. Journal of Biological Chemistry. ,vol. 253, pp. 413- 423 ,(1978) , 10.1016/S0021-9258(17)38225-X
T A Kunkel, L A Loeb, M F Goodman, On the fidelity of DNA replication. The accuracy of T4 DNA polymerases in copying phi X174 DNA in vitro. Journal of Biological Chemistry. ,vol. 259, pp. 1539- 1545 ,(1984) , 10.1016/S0021-9258(17)43442-9
Allan M. Maxam, Walter Gilbert, [57] Sequencing end-labeled DNA with base-specific chemical cleavages Nucleic Acids Part I. ,vol. 65, pp. 499- 560 ,(1980) , 10.1016/S0076-6879(80)65059-9
Andrew M. Holmes, Ian P. Hesslewood, Irving R. Johnston, The Occurrence of Multiple Activities in the High‐Molecular‐Weight DNA Polymerase Fraction of Mammalian Tissues FEBS Journal. ,vol. 43, pp. 487- 499 ,(1974) , 10.1111/J.1432-1033.1974.TB03436.X
L A Loeb, D K Dube, M A Sirover, On the fidelity of DNA replication. Metal activation of Escherichia coli DNA polymerase I Journal of Biological Chemistry. ,vol. 254, pp. 107- 111 ,(1979) , 10.1016/S0021-9258(17)30278-8
Teresa Shu Fong Wang, David Korn, Specificity of the catalytic interaction of human DNA polymerase beta with nucleic acid substrates. Biochemistry. ,vol. 21, pp. 1597- 1608 ,(1982) , 10.1021/BI00536A021
Jerry B. Dodgson, Robert D. Wells, Action of single-strand specific nucleases on model DNA heteroduplexes of defined size and sequence. Biochemistry. ,vol. 16, pp. 2374- 2379 ,(1977) , 10.1021/BI00630A010