Fate or coincidence: do COPD and major depression share genetic risk factors?

作者: Timothy S Blackwell , Timothy S Blackwell , Timothy S Blackwell , David Samuels , Melinda C Aldrich

DOI: 10.1093/HMG/DDAB068

关键词: OncologyInternal medicineMajor depressive disorderGenome-wide association studyOdds ratioComorbidityGenetic predispositionMood disordersLinkage disequilibriumCOPDBiology

摘要: Major depressive disorder (MDD) is a common comorbidity in chronic obstructive pulmonary disease (COPD), affecting up to 57% of patients with COPD. While the COPD and MDD well established, causal relationship between these two diseases unclear. A large-scale electronic health record (EHR) clinical biobank genome-wide association study (GWAS) summary statistics for lung function traits were used investigate potential shared underlying genetic susceptibility MDD. Linkage disequilibrium score regression was estimate correlation phenotypes. Polygenic scores (PRS) developed perform phenome-wide (PheWAS). Multi-trait-based conditional joint analysis identified single nucleotide polymorphisms (SNPs) influencing both We found correlations all small not statistically significant. PRS-MDD significantly associated an increased risk PheWAS (odds ratio [OR] = 1.12, 95% confidence interval [CI]: 1.09-1.16) when adjusting age, sex, ancestry, but this became attenuated controlling smoking history (OR 1.08, CI: 1.04-1.13). No significant associations PRS three SNPs that may contribute traits, which previously mood disorders Our findings suggest observed be driven by strong architecture.

参考文章(108)
Jennifer W Tidey, Mollie E Miller, Smoking cessation and reduction in people with chronic mental illness. BMJ. ,vol. 351, pp. 454- 463 ,(2015) , 10.1136/BMJ.H4065
E Krapohl, J Euesden, D Zabaneh, J-B Pingault, K Rimfeld, S von Stumm, P S Dale, G Breen, P F O'Reilly, R Plomin, Phenome-wide analysis of genome-wide polygenic scores Molecular Psychiatry. ,vol. 21, pp. 1188- 1193 ,(2016) , 10.1038/MP.2015.126
Yann C. Klimentidis, Ana I. Vazquez, Gustavo de los Campos, David B. Allison, Mark T. Dransfield, Victor J. Thannickal, Heritability of pulmonary function estimated from pedigree and whole-genome markers. Frontiers in Genetics. ,vol. 4, pp. 174- 174 ,(2013) , 10.3389/FGENE.2013.00174
Joshua C Denny, Lisa Bastarache, Marylyn D Ritchie, Robert J Carroll, Raquel Zink, Jonathan D Mosley, Julie R Field, Jill M Pulley, Andrea H Ramirez, Erica Bowton, Melissa A Basford, David S Carrell, Peggy L Peissig, Abel N Kho, Jennifer A Pacheco, Luke V Rasmussen, David R Crosslin, Paul K Crane, Jyotishman Pathak, Suzette J Bielinski, Sarah A Pendergrass, Hua Xu, Lucia A Hindorff, Rongling Li, Teri A Manolio, Christopher G Chute, Rex L Chisholm, Eric B Larson, Gail P Jarvik, Murray H Brilliant, Catherine A McCarty, Iftikhar J Kullo, Jonathan L Haines, Dana C Crawford, Daniel R Masys, Dan M Roden, Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data Nature Biotechnology. ,vol. 31, pp. 1102- 1110 ,(2013) , 10.1038/NBT.2749
Nirupama Putcha, Milo A. Puhan, Nadia N. Hansel, M. Brad Drummond, Cynthia M. Boyd, Impact of co-morbidities on self-rated health in self-reported COPD: An analysis of NHANES 2001–2008 COPD: Journal of Chronic Obstructive Pulmonary Disease. ,vol. 10, pp. 324- 332 ,(2013) , 10.3109/15412555.2012.744963
Joy Miller, Lisa D Edwards, Alvar Agustí, Per Bakke, Peter MA Calverley, Bartolome Celli, Harvey O Coxson, Courtney Crim, David A Lomas, Bruce E Miller, Steve Rennard, Edwin K Silverman, Ruth Tal-Singer, Jørgen Vestbo, Emiel Wouters, Julie C Yates, William MacNee, Evaluation of COPD Longitudinally to Identify Predictive Surrogate Endpoints (ECLIPSE) Investigators, Comorbidity, systemic inflammation and outcomes in the ECLIPSE cohort. Respiratory Medicine. ,vol. 107, pp. 1376- 1384 ,(2013) , 10.1016/J.RMED.2013.05.001
Nadia Solovieff, Chris Cotsapas, Phil H. Lee, Shaun M. Purcell, Jordan W. Smoller, Pleiotropy in complex traits: challenges and strategies Nature Reviews Genetics. ,vol. 14, pp. 483- 495 ,(2013) , 10.1038/NRG3461
Russell C. Callaghan, Scott Veldhuizen, Trincy Jeysingh, Chloe Orlan, Candida Graham, Gwen Kakouris, Gary Remington, Jodi Gatley, Patterns of tobacco-related mortality among individuals diagnosed with schizophrenia, bipolar disorder, or depression Journal of Psychiatric Research. ,vol. 48, pp. 102- 110 ,(2014) , 10.1016/J.JPSYCHIRES.2013.09.014
DM Roden, JM Pulley, MA Basford, GR Bernard, EW Clayton, JR Balser, DR Masys, Development of a large-scale de-identified DNA biobank to enable personalized medicine. Clinical Pharmacology & Therapeutics. ,vol. 84, pp. 362- 369 ,(2008) , 10.1038/CLPT.2008.89