Chemical Physics in Living Cells-using Light to Visualize and Control Intracellular Signal Transduction †

作者: Vishnu V. Krishnamurthy , Kai Zhang

DOI: 10.1063/1674-0068/31/CJCP1806152

关键词: Computer scienceSignal transductionControl (linguistics)Cell signalingProtein–protein interactionSignalChemical physicsIntracellularOptogeneticsIntracellular signal transduction

摘要: Cells are crowded microenvironments filled with macromolecules undergoing constant physical and chemical interactions. The physicochemical makeup of the cells affects various cellular responses, determines cell-cell interactions influences cell decisions. Chemical properties differ between within cells. Moreover, these subject to dynamic changes in response environmental signals, which often demand adjustments or states intracellular molecules. Indeed, responses such as gene expression rely on faithful relay information from outside inside cell, a process termed signal transduction. traverses complex path across subcellular spaces variable chemistry, sometimes even influencing it. Understanding molecular signaling molecules their environments is vital our understanding cell. Exploring intricate possible today largely because experimental theoretical tools. Here, we focus one tool that commonly used physics studies — light. We summarize recent work uses light both visualize environment also control processes along axis highlight accomplishments optical microscopy optogenetics, an emerging strategy utilizes live believe optogenetics lends unprecedented spatiotemporal precision manipulation biological contexts. hope use this demonstrate new opportunities for physicists who interested pursuing biomedical questions.

参考文章(178)
Robert H. Webb, Theoretical basis of confocal microscopy. Methods in Enzymology. ,vol. 307, pp. 3- 20 ,(1999) , 10.1016/S0076-6879(99)07003-2
Iwo König, Arash Zarrine-Afsar, Mikayel Aznauryan, Andrea Soranno, Bengt Wunderlich, Fabian Dingfelder, Jakob C Stüber, Andreas Plückthun, Daniel Nettels, Benjamin Schuler, Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells Nature Methods. ,vol. 12, pp. 773- 779 ,(2015) , 10.1038/NMETH.3475
Suzanne E. Schindler, Jordan G. McCall, Ping Yan, Krzystof L. Hyrc, Mingjie Li, Chandra L. Tucker, Jin-Moo Lee, Michael R. Bruchas, Marc I. Diamond, Photo-activatable Cre recombinase regulates gene expression in vivo Scientific Reports. ,vol. 5, pp. 13627- 13627 ,(2015) , 10.1038/SREP13627
Paul R. Selvin, The renaissance of fluorescence resonance energy transfer Nature Structural & Molecular Biology. ,vol. 7, pp. 730- 734 ,(2000) , 10.1038/78948
Malgorzata Borowiak, Wallis Nahaboo, Martin Reynders, Katharina Nekolla, Pierre Jalinot, Jens Hasserodt, Markus Rehberg, Marie Delattre, Stefan Zahler, Angelika Vollmar, Dirk Trauner, Oliver Thorn-Seshold, Photoswitchable Inhibitors of Microtubule Dynamics Optically Control Mitosis and Cell Death Cell. ,vol. 162, pp. 403- 411 ,(2015) , 10.1016/J.CELL.2015.06.049
Jared E. Toettcher, Delquin Gong, Wendell A. Lim, Orion D. Weiner, Light control of plasma membrane recruitment using the Phy-PIF system. Methods in Enzymology. ,vol. 497, pp. 409- 423 ,(2011) , 10.1016/B978-0-12-385075-1.00017-2
Edward R. Ballister, Swathi Ayloo, David M. Chenoweth, Michael A. Lampson, Erika L.F. Holzbaur, Optogenetic control of organelle transport using a photocaged chemical inducer of dimerization Current Biology. ,vol. 25, ,(2015) , 10.1016/J.CUB.2015.03.056
Liting Duan, Daphne Che, Kai Zhang, Qunxiang Ong, Shunling Guo, Bianxiao Cui, Optogenetic control of molecular motors and organelle distributions in cells. Chemistry & Biology. ,vol. 22, pp. 671- 682 ,(2015) , 10.1016/J.CHEMBIOL.2015.04.014
Yuan Lin, David S.W. Protter, Michael K. Rosen, Roy Parker, Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins Molecular Cell. ,vol. 60, pp. 208- 219 ,(2015) , 10.1016/J.MOLCEL.2015.08.018
Yick-Bun Chan, Olga V. Alekseyenko, Edward A. Kravitz, Optogenetic Control of Gene Expression in Drosophila PLOS ONE. ,vol. 10, pp. e0138181- ,(2015) , 10.1371/JOURNAL.PONE.0138181