The Effect of Backbone‐Heteroatom Substitution on the Folding of Peptides – A Single Fluorine Substituent Prevents a β‐Heptapeptide from Folding into a 314‐Helix (NMR Analysis)

作者: Raveendra?I. Mathad , Francois Gessier , Dieter Seebach , Bernhard Jaun

DOI: 10.1002/HLCA.200590008

关键词: HelixMoietyTurn (biochemistry)ChemistryHeteroatomSubstituentAlkane stereochemistryStereochemistryGeminalFolding (chemistry)

摘要: The β-heptapeptides H-βhVal-βhAla-βhLeu-βhAla(Xn)-βhVal-βhAla-βhLeu-OH 3–7 with central 3-amino-2-fluoro-, 3-amino-2,2-difluoro-, or 3-amino-2-hydroxybutanoic acid residues (βhAla(Xn)) of like and unlike configuration were subjected to a detailed NMR analysis in MeOH solution. For the geminal difluoro for F- OH-substituted derivatives u-configuration (see 5, 4, 7, resp.), 14-helices found, i.e., axial disposition hetero atoms on helix. two compounds containing l-configured β-amino moieties 3 6) are not helical over full lengths chains; they have ‘quasi-helical’ termini turn consisting ten-membered H-bonded ring (Fig. 2, d e). Quantum-mechanical calculations l- u-AcNH-CHMe-CHF-CONH2 confirm observed preference conformation antiperiplanar arrangement FC CO bond. calculated energy difference between ‘non-helical’ geometry this moiety hypothetical one is 6.4 kcal/mol (Fig. 3).

参考文章(45)
M Tajima, T Iida, S Yoshida, K Komatsu, R Namba, M Yanagi, M Noguchi, H Okamoto, The reaction product of peptidylglycine alpha-amidating enzyme is a hydroxyl derivative at alpha-carbon of the carboxyl-terminal glycine. Journal of Biological Chemistry. ,vol. 265, pp. 9602- 9605 ,(1990) , 10.1016/S0021-9258(19)38709-5
B A Eipper, R E Mains, A S Murthy, Purification and characterization of peptidylglycine alpha-amidating monooxygenase from bovine neurointermediate pituitary. Journal of Biological Chemistry. ,vol. 261, pp. 1815- 1822 ,(1986) , 10.1016/S0021-9258(17)36013-1
W.R. Gray, A. Luque, B.M. Olivera, J. Barrett, L.J. Cruz, Peptide toxins from Conus geographus venom. Journal of Biological Chemistry. ,vol. 256, pp. 4734- 4740 ,(1981) , 10.1016/S0021-9258(19)69313-0
Zev Lidert, Salo Gronowitz, Preparation of 2-Substituted Derivatives of Some α-Amino Acids Synthesis. ,vol. 1980, pp. 322- 324 ,(1980) , 10.1055/S-1980-29012
Claudio F. Tormena, Roberto Rittner, Raymond J. Abraham, Ernani A. Basso, Rodrigo M. Pontes, Conformational analysis. Part 33. An NMR, solvation and theoretical investigation of conformational isomerism in N,N-dimethylfluoroacetamide and N,N-dimethyl-α-fluoropropionamide Journal of The Chemical Society-perkin Transactions 1. pp. 2054- 2059 ,(2000) , 10.1039/B004685J
Thereza Soares, Markus Christen, Kaifeng Hu, Wilfred F. van Gunsteren, Alpha- and beta-polypeptides show a different stability of helical secondary structure Tetrahedron. ,vol. 60, pp. 7775- 7780 ,(2004) , 10.1016/J.TET.2004.06.062
HAMAO UMEZAWA, TAKAAKI AOYAGI, HIROYUKI SUDA, MASA HAMADA, TOMIO TAKEUCHI, BESTATIN, AN INHIBITOR OF AMINOPEPTIDASE B, PRODUCED BY ACTINOMYCETES The Journal of Antibiotics. ,vol. 29, pp. 97- 99 ,(1976) , 10.7164/ANTIBIOTICS.29.97
David F. Hook, François Gessier, Christian Noti, Peter Kast, Dieter Seebach, Probing the Proteolytic Stability of β‐Peptides Containing α‐Fluoro‐ and α‐Hydroxy‐β‐Amino Acids ChemBioChem. ,vol. 5, pp. 691- 706 ,(2004) , 10.1002/CBIC.200300827
David O’Hagan, Clair Bilton, Judith A. K. Howard, Lee Knight, David J. Tozer, The preferred conformation of N-β-fluoroethylamides. Observation of the fluorine amide gauche effect Journal of The Chemical Society-perkin Transactions 1. pp. 605- 607 ,(2000) , 10.1039/B000205O
Dieter Seebach, Paola E. Ciceri, Mark Overhand, Bernhard Jaun, Dario Rigo, Lukas Oberer, Ulrich Hommel, Ren� Amstutz, Hans Widmer, Probing the Helical Secondary Structure of Short‐Chain β‐Peptides Helvetica Chimica Acta. ,vol. 79, pp. 2043- 2066 ,(1996) , 10.1002/HLCA.19960790802