SearchGUI: An open‐source graphical user interface for simultaneous OMSSA and X!Tandem searches

作者: Marc Vaudel , Harald Barsnes , Frode S. Berven , Albert Sickmann , Lennart Martens

DOI: 10.1002/PMIC.201000595

关键词: Open sourceOperating systemGraphical user interfaceTandemStandard techniqueSimulationField (computer science)Search engineIdentification (information)Search algorithmComputer science

摘要: The identification of proteins by mass spectrometry is a standard technique in the field proteomics, relying on search engines to perform identifications acquired spectra. Here, we present user-friendly, lightweight and open-source graphical user interface called SearchGUI (http://searchgui.googlecode.com), for configuring running freely available OMSSA (open algorithm) X!Tandem simultaneously. Freely under permissible Apache2 license, supported Windows, Linux OSX.

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