Recent human evolution has shaped geographical differences in susceptibility to disease.

作者: Urko M Marigorta , Oscar Lao , Ferran Casals , Francesc Calafell , Carlos Morcillo-Suárez

DOI: 10.1186/1471-2164-12-55

关键词: Single-nucleotide polymorphismGenetic associationBiologyAlleleGenetic variabilityGeneticsDiseaseFalse positive paradoxGenome-wide association studyGenetic variation

摘要: Background: Searching for associations between genetic variants and complex diseases has been a very active area of research over two decades. More than 51,000 potential have studied published, figure that keeps increasing, especially with the recent explosion array-based Genome-Wide Association Studies. Even if number true described so far is high, many putative risk detected failed to be consistently replicated are widely considered false positives. Here, we focus on worldwide patterns replicability published association studies. Results: We report three main findings. First, contrary previous results, genes associated present lower degrees differentiation among human populations average genome-wide levels. Second, also differences in disease associated-loci Europeans East Asians highly correlated these populations. Finally, increased levels high-frequency derived alleles European Asian when compared African Conclusions: Our findings highlight heterogeneous nature etiology disease, confirm importance evolutionary history our species current susceptibility could cast doubts status as positives some replicate across

参考文章(62)
Neil J. Risch, Searching for genetic determinants in the new millennium Nature. ,vol. 405, pp. 847- 856 ,(2000) , 10.1038/35015718
John P.A. Ioannidis, Evangelia E. Ntzani, Thomas A. Trikalinos, Despina G. Contopoulos-Ioannidis, Replication validity of genetic association studies. Nature Genetics. ,vol. 29, pp. 306- 309 ,(2001) , 10.1038/NG749
John P A Ioannidis, Evangelia E Ntzani, Thomas A Trikalinos, 'Racial' differences in genetic effects for complex diseases. Nature Genetics. ,vol. 36, pp. 1312- 1318 ,(2004) , 10.1038/NG1474
Wei Yu, Marta Gwinn, Melinda Clyne, Ajay Yesupriya, Muin J Khoury, A navigator for human genome epidemiology Nature Genetics. ,vol. 40, pp. 124- 125 ,(2008) , 10.1038/NG0208-124
Krina T Zondervan, Lon R Cardon, None, The complex interplay among factors that influence allelic association Nature Reviews Genetics. ,vol. 5, pp. 89- 100 ,(2004) , 10.1038/NRG1270
Jessica Lasky-Su, Helen N. Lyon, Valur Emilsson, Iris M. Heid, Cliona Molony, Benjamin A. Raby, Ross Lazarus, Barbara Klanderman, Manuel E. Soto-Quiros, Lydiana Avila, Edwin K. Silverman, Gudmar Thorleifsson, Unnur Thorsteinsdottir, Florian Kronenberg, Caren Vollmert, Thomas Illig, Caroline S. Fox, Daniel Levy, Nan Laird, Xiao Ding, Matt B. McQueen, Johannah Butler, Kristin Ardlie, Constantina Papoutsakis, George Dedoussis, Christopher J. O'Donnell, H.-Erich Wichmann, Juan C. Celedón, Eric Schadt, Joel Hirschhorn, Scott T. Weiss, Kari Stefansson, Christoph Lange, On the replication of genetic associations: timing can be everything! American Journal of Human Genetics. ,vol. 82, pp. 849- 858 ,(2008) , 10.1016/J.AJHG.2008.01.018
Belén Lorente Galdos, Ignacio Medina, Carlos Morcillo Suarez, Txema Heredia, Ángel Carreño Torres, Ricardo Sangrós, Josep Alegre, Guillermo Pita, Gemma Vellalta, Nuria Malats, David G. Pisano, Joaquín Dopazo, Arcadi Navarro, Select Your SNPs (SYSNPs): a web tool for automatic and massive selection of SNPs data mining in bioinformatics. ,vol. 6, pp. 324- 334 ,(2012) , 10.1504/IJDMB.2012.049249
Joshua M Akey, Ge Zhang, Kun Zhang, Li Jin, Mark D Shriver, Interrogating a High-Density SNP Map for Signatures of Natural Selection Genome Research. ,vol. 12, pp. 1805- 1814 ,(2002) , 10.1101/GR.631202