Dissection of Potato Complex Traits by Linkage and Association Genetics as Basis for Developing Molecular Diagnostics in Breeding Programs

作者: Christiane Gebhardt , Claude Urbany , Benjamin Stich

DOI: 10.1007/978-94-007-7575-6_3

关键词: GenomeQuantitative trait locusPhenotypeAssociation mappingGenetic linkageMolecular diagnosticsBiologyMolecular breedingGeneGenetics

摘要: Most characters relevant for the development of commercial potato varieties are complex, meaning that they controlled by multiple genetic and environmental factors. Over past 20 years, complex traits have been dissected linkage mapping in quantitative trait loci (QTL) using DNA-based markers. QTL was performed genetically diverse diploid few tetraploid bi-parental progeny. The integration various maps revealed regions genome where genes controlling located. This combination with known to functionally contribute a given phenotype identified candidate traits. More recently, association entered stage resulted identification first markers diagnostic populations cultivars related descent. Association based on DNA polymorphisms functional positional might be causal natural variation resistance late blight or tuber quality such as processing bruising resistance.

参考文章(223)
M. Visker, L. Keizer, H. Van Eck, E. Jacobsen, L. Colon, P. Struik, Can the QTL for late blight resistance on potato chromosome 5 be attributed to foliage maturity type Theoretical and Applied Genetics. ,vol. 106, pp. 317- 325 ,(2003) , 10.1007/S00122-002-1021-2
E. Zimnoch-Guzowska, W. Marczewski, R. Lebecka, B. Flis, R. Schäfer-Pregl, F. Salamini, C. Gebhardt, QTL analysis of new sources of resistance to Erwinia carotovora ssp. atroseptica in potato done by AFLP, RFLP, and resistance-gene-like markers Crop Science. ,vol. 40, pp. 1156- 1167 ,(2000) , 10.2135/CROPSCI2000.4041156X
Johannes M. Sandbrink, Leontine T. Colon, Petra J.C.C. Wolters, Willem J. Stiekema, Two related genotypes of Solanum microdontum carry different segregating alleles for field resistance to Phytophthora infestans Molecular Breeding. ,vol. 6, pp. 215- 225 ,(2000) , 10.1023/A:1009697318518
Jeffry M. Thornsberry, Major M. Goodman, John Doebley, Stephen Kresovich, Dahlia Nielsen, Edward S. Buckler, Dwarf8 polymorphisms associate with variation in flowering time Nature Genetics. ,vol. 28, pp. 286- 289 ,(2001) , 10.1038/90135
W J Ewens, R S Spielman, R E McGinnis, Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). American Journal of Human Genetics. ,vol. 52, pp. 506- 516 ,(1993)
Allison Db, Transmission-disequilibrium tests for quantitative traits. American Journal of Human Genetics. ,vol. 60, pp. 676- 690 ,(1997)
J. B. Harborne, P. M. Dey, Methods in plant biochemistry Academic Press. ,(1989)
Frank LW Takken, Matthieu HAJ Joosten, Plant Resistance Genes: Their Structure, Function and Evolution European Journal of Plant Pathology. ,vol. 106, pp. 699- 713 ,(2000) , 10.1023/A:1026571130477
I. Simko, S. McMurry, H. M. Yang, A. Manschot, P. J. Davies, E. E. Ewing, Evidence from Polygene Mapping for a Causal Relationship between Potato Tuber Dormancy and Abscisic Acid Content. Plant Physiology. ,vol. 115, pp. 1453- 1459 ,(1997) , 10.1104/PP.115.4.1453