An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.

作者: Catherine A Brownstein , Alan H Beggs , Nils Homer , Barry Merriman , Timothy W Yu

DOI: 10.1186/GB-2014-15-3-R53

关键词: Best practiceGenetic testingBiologyGenomicsDNA sequencingGenomeWhole genome sequencingData scienceBioinformaticsCLARITYExome

摘要: Background There is tremendous potential for genome sequencing to improve clinical diagnosis and care once it becomes routinely accessible, but this will require formalizing research methods into best practices in the areas of sequence data generation, analysis, interpretation reporting. The CLARITY Challenge was designed spur convergence diagnosing genetic disease starting from case history data. DNA samples were obtained three families with heritable disorders genomic donated by platform vendors. challenge analyze interpret these goals identifying disease-causing variants reporting findings a clinically useful format. Participating contestant groups solicited broadly, an independent panel judges evaluated their performance.

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