A Phototautomerizable Model DNA Base Pair

作者: Anthony K. Ogawa , Osama K. Abou-Zied , Vickie Tsui , Ralph Jimenez , David A. Case

DOI: 10.1021/JA001778N

关键词: BenzoxazoleSolvationBase pairCircular dichroismDuplex (building)TautomerAP sitePhotochemistryChemistryNucleobase

摘要: 2-(2‘-Hydroxyphenyl)benzoxazole (HBO) undergoes rapid photoinduced proton transfer from the enol-imine to keto-amine tautomer. When incorporated in duplex DNA opposite an abasic site, HBO appears be a good mimic of natural base pair based on stability, UV and CD spectroscopy, molecular dynamics simulations. In chosen sequence context, exists exclusively as syn-enol tautomer, which is consistent with environment model that dominated by neighboring nucleobases not solvation. The efficiently keto-tautomer, should allow for study tautomerization within DNA.

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