The proteome of Mycoplasma genitalium

作者: Valerie C. Wasinger , J. Dennis Pollack , Ian Humphery-Smith

DOI: 10.1046/J.1432-1327.2000.01183.X

关键词: BiochemistryMinimal genomeMolecular biologyGene productPeptide mass fingerprintingMycoplasma genitaliumProteomicsProteomeBiologyRibosomal proteinGene

摘要: Mycoplasma genitalium is the smallest member of class Mollicutes, with a genome size 580 kb. It has potential to express 480 gene products, and therefore considered be an excellent model assess: (a) minimum metabolism required by free living cell; (b) proteomic technologies information obtained proteome analysis. Here, we report on most complete observed at 73% (expected proteome), analysed 33% (reported proteome). The use four overlapping pH windows in conjunction SDS/PAGE allowed 427 distinct proteins resolved association exponential growth M. genitalium. Proof expression for 201 sufficient abundance silver stained two-dimensional gels was using peptide mass fingerprinting (PMF) which 158 were identified. product modification even simplest known self-replicating organism quantified ratio 1.22 : 1, more than genes. A reduction protein 42% post-exponentially-grown cells. DnaK, GroEL, DNA gyrase, cytadherence accessory significantly elevated, while some ribosomal reduced relative abundance. strengths weaknesses techniques employed assessed respect predicted derived from sequence information. Proteomics shown provide perspective into biochemical metabolic activities this organism, beyond that obtainable sequencing alone.

参考文章(41)
M. Sherman, A.L. Goldberg, Heat shock-induced phosphorylation of GroEL alters its binding and dissociation from unfolded proteins. Journal of Biological Chemistry. ,vol. 269, pp. 31479- 31483 ,(1994) , 10.1016/S0021-9258(18)31719-8
Stuart J Cordwell, David J Basseal, J.Dennis Pollack, Ian Humphery-Smith, Malate/lactate dehydrogenase in mollicutes: evidence for a multienzyme protein Gene. ,vol. 195, pp. 113- 120 ,(1997) , 10.1016/S0378-1119(97)00063-2
Matthias Wilm, Andrej Shevchenko, Tony Houthaeve, Stephen Breit, Lothar Schweigerer, Theodore Fotsis, Matthias Mann, None, Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry Nature. ,vol. 379, pp. 466- 469 ,(1996) , 10.1038/379466A0
Thomas Proft, Helmut Hilbert, Helga Plagens, Richard Herrmann, The P200 protein of Mycoplasma pneumoniae shows common features with the cytadherence-associated proteins HMW1 and HMW3. Gene. ,vol. 171, pp. 79- 82 ,(1996) , 10.1016/0378-1119(96)00014-5
Nan H. Albertson, Thomas Nyström, Staffan Kjelleberg, Starvation-induced modulations in binding protein-dependent glucose transport by the marine Vibrio sp. S14. Fems Microbiology Letters. ,vol. 70, pp. 205- 209 ,(1990) , 10.1111/J.1574-6968.1990.TB13979.X
G.J. McGarrity, G. Constantopoulos, J.A. Barranger, Effect of mycoplasma infection on pyruvate dehydrogenase complex activity of normal and pyruvate dehydrogenase complex-deficient fibroblasts Experimental Cell Research. ,vol. 151, pp. 557- 562 ,(1984) , 10.1016/0014-4827(84)90403-8
Christian Scholz, Matthias Mücke, Michael Rape, Anja Pecht, Andreas Pahl, Holger Bang, Franz X Schmid, Recognition of protein substrates by the prolyl isomerase trigger factor is independent of proline residues. Journal of Molecular Biology. ,vol. 277, pp. 723- 732 ,(1998) , 10.1006/JMBI.1997.1604
J. Dennis Pollack, Mycoplasma genes: a case for reflective annotation Trends in Microbiology. ,vol. 5, pp. 413- 419 ,(1997) , 10.1016/S0966-842X(97)01113-X