Site-specific genomic (SSG) and random domain-localized (RDL) mutagenesis in yeast.

作者: Misa Gray , Martin Kupiec , Saul M Honigberg

DOI: 10.1186/1472-6750-4-7

关键词: Saccharomyces cerevisiaeGeneURA3BiologyGeneticsPlasmidPoint mutationYeastLocus (genetics)Genome

摘要: A valuable weapon in the arsenal available to yeast geneticists is ability introduce specific mutations into genome. In particular, methods have been developed deletions genome using PCR fragments. These are highly efficient because they do not require cloning plasmids. We modified existing method for introducing (S. cerevisiae) fragments order target point this describe two PCR-based directing such that final product contains no other disruptions. first method, site-specific genomic (SSG) mutagenesis, a mutation targeted second random domain-localized (RDL) introduced at within domain of gene. Both sequential transformations, transformation integrates URA3 marker locus, and replaces with fragment containing one or few mutations. This synthesized primer (SSG mutagenesis) by error-prone (RDL mutagenesis). SSG proximal site incorporated higher frequencies than distal mutations, however can be efficiently distances least 500 bp from insertion. RDL ensure incorporation occurs approximately equal throughout region, region deleted same time integrated. mutagenesis allow easily without disrupting native locus.

参考文章(29)
R. Daniel Gietz, Robin A. Woods, Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method Methods in Enzymology. ,vol. 350, pp. 87- 96 ,(2002) , 10.1016/S0076-6879(02)50957-5
Francesca Storici, L. Kevin Lewis, Michael A. Resnick, In vivo site-directed mutagenesis using oligonucleotides Nature Biotechnology. ,vol. 19, pp. 773- 776 ,(2001) , 10.1038/90837
Robert S. Sikorski, Jef D. Boeke, In vitro mutagenesis and plasmid shuffling: from cloned gene to mutant yeast. Methods in Enzymology. ,vol. 194, pp. 302- 318 ,(1991) , 10.1016/0076-6879(91)94023-6
David C. Amberg, David Botstein, Ellen M. Beasley, Precise gene disruption in Saccharomyces cerevisiae by double fusion polymerase chain reaction. Yeast. ,vol. 11, pp. 1275- 1280 ,(1995) , 10.1002/YEA.320111307
Kedar Purnapatre, Sarah Piccirillo, Brandt L. Schneider, Saul M. Honigberg, The CLN3/SWI6/CLN2 pathway and SNF1 act sequentially to regulate meiotic initiation in Saccharomyces cerevisiae Genes to Cells. ,vol. 7, pp. 675- 691 ,(2002) , 10.1046/J.1365-2443.2002.00551.X
Suzanna Scott-Drew, C Michael VL Wong, James AH Murray, None, DNA PLASMID TRANSMISSION IN YEAST IS ASSOCIATED WITH SPECIFIC SUB-NUCLEAR LOCALISATION DURING CELL DIVISION Cell Biology International. ,vol. 26, pp. 393- 405 ,(2002) , 10.1006/CBIR.2002.0867
M. F. F. Abdullah, R. H. Borts, Meiotic recombination frequencies are affected by nutritional states in Saccharomyces cerevisiae Proceedings of the National Academy of Sciences of the United States of America. ,vol. 98, pp. 14524- 14529 ,(2001) , 10.1073/PNAS.201529598