Development of an aquatic pathogen database (AquaPathogen X) and its utilization in tracking emerging fish virus pathogens in North America
作者： E J Emmenegger , E Kentop , T M Thompson , S Pittam , A Ryan
DOI: 10.1111/J.1365-2761.2011.01270.X
关键词: Virus 、 Shrimp 、 Aquatic animal 、 Biology 、 Fish <Actinopterygii> 、 Microbiology 、 Shellfish 、 Pathogen 、 Database 、 Host (biology) 、 Molecular epidemiology
摘要: The AquaPathogen X database is a template for recording information on individual isolates of aquatic pathogens and freely available download (http://wfrc.usgs.gov). This can accommodate the nucleotide sequence data generated in molecular epidemiological studies along with myriad abiotic biotic traits associated various (e.g. viruses, parasites bacteria) from multiple animal host species fish, shellfish shrimp). cataloguing different simultaneously unique feature to database, which be used surveillance emerging diseases elucidation key risk factors pathogen incursions into new water systems. An application that stores profiles fish virus isolates, called Fish ViroTrak, was also developed. Exported records two rhabdovirus North America were implementation separate web-accessible databases: Molecular Epidemiology Aquatic Pathogens infectious haematopoietic necrosis (MEAP-IHNV) (http://gis.nacse.org/ihnv/) released 2006 MEAP- viral haemorrhagic septicaemia (http://gis.nacse.org/vhsv/) 2010.
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