DNA methylation of a NF-κB binding site in the aquaporin 5 promoter impacts on mortality in sepsis.

作者: Katharina Rump , Matthias Unterberg , Agnes Dahlke , Hartmuth Nowak , Björn Koos

DOI: 10.1038/S41598-019-55051-8

关键词: Molecular biologyDNA binding siteDNA methylationMethylationTranscription factorBiologyPromoterSepsisEpigeneticsBinding site

摘要: Altered aquaporin 5 (AQP5) expression in immune cells impacts on key mechanisms of inflammation and is associated with sepsis survival. Since epigenetic regulation via DNA methylation might contribute to a differential AQP5 sepsis, we tested the hypotheses that promotor (1) influences expression, (2) 30-day survival septic patients, (3) alters nuclear transcription factor NF-κB binding. mRNA was quantified by real-time PCR whole blood samples 135 patients. In silico computer analysis promoter (nt-567 nt-975) revealed seven putative inflammatory binding sites these analyzed. Electrophoretic mobility shift assays were performed assess region nt-937. After adjustment for multiple testing, greater rate found at cytosine site nt-937 linked non-survivors compared survivors (p = 0.002, padj = 0.014). This (p = 0.037). Greater (≥16%) also an independently increased risk death within 30 days (HR: 3.31; 95% CI: 1.54–6.23; p = 0.002). We detected functionally important (nt-937) inflammatorily acting NF-κB, non-survivors. Thus, APQ5 methylation, presumably related binding, prognostically relevant demonstrates changes impact outcome.

参考文章(39)
Jing-Dong Zhou, Yu-Xin Wang, Ting-Juan Zhang, Dong-qin Yang, Dong-Ming Yao, Hong Guo, Lei Yang, Ji-Chun Ma, Xiang-Mei Wen, Jing Yang, Jiang Lin, Jun Qian, Epigenetic inactivation of DLX4 is associated with disease progression in chronic myeloid leukemia. Biochemical and Biophysical Research Communications. ,vol. 463, pp. 1250- 1256 ,(2015) , 10.1016/J.BBRC.2015.06.095
Leslie M. Cope, Mary Jo Fackler, Zoila Lopez-Bujanda, Antonio C. Wolff, Kala Visvanathan, Joe W. Gray, Saraswati Sukumar, Christopher B. Umbricht, Do Breast Cancer Cell Lines Provide a Relevant Model of the Patient Tumor Methylome? PLoS ONE. ,vol. 9, pp. e105545- ,(2014) , 10.1371/JOURNAL.PONE.0105545
Katharina Rump, Peter Brendt, Ulrich H. Frey, Simon Thomas Schäfer, Winfried Siffert, Jürgen Peters, Michael Adamzik, Aquaporin 1 and 5 expression evoked by the β2 adrenoreceptor agonist terbutaline and lipopolysaccharide in mice and in the human monocytic cell line THP-1 is differentially regulated. Shock. ,vol. 40, pp. 430- 436 ,(2013) , 10.1097/SHK.0000000000000035
Johji Nomura, Akinori Hisatsune, Takeshi Miyata, Yoichiro Isohama, The role of CpG methylation in cell type-specific expression of the aquaporin-5 gene. Biochemical and Biophysical Research Communications. ,vol. 353, pp. 1017- 1022 ,(2007) , 10.1016/J.BBRC.2006.12.126
M. C. Papadopoulos, S. Saadoun, A. S. Verkman, Aquaporins and cell migration Pflügers Archiv - European Journal of Physiology. ,vol. 456, pp. 693- 700 ,(2008) , 10.1007/S00424-007-0357-5
Christa A Schorr, Sergio Zanotti, R Phillip Dellinger, Severe sepsis and septic shock: management and performance improvement. Virulence. ,vol. 5, pp. 190- 199 ,(2014) , 10.4161/VIRU.27409
Bilal Hasan, Feng-sen Li, Adila Siyit, Ehbal Tuyghun, Jing-hua Luo, Halmurat Upur, Abduxukur Ablimit, Expression of aquaporins in the lungs of mice with acute injury caused by LPS treatment. Respiratory Physiology & Neurobiology. ,vol. 200, pp. 40- 45 ,(2014) , 10.1016/J.RESP.2014.05.008
Roger C. Bone, Definitions for sepsis and organ failure. Critical Care Medicine. ,vol. 20, pp. 724- 726 ,(1992) , 10.1097/00003246-199206000-00002
Raluca Yonescu, M Douglas Lee, Nancy A Jenkins, Surabhi Raina, Constance A Griffin, Neal G Copeland, Debra J Gilbert, Kushal Y Bhakta, Peter Agre, Gregory M Preston, None, The Human Aquaporin-5 Gene MOLECULAR CHARACTERIZATION AND CHROMOSOMAL LOCALIZATION Journal of Biological Chemistry. ,vol. 271, pp. 8599- 8604 ,(1996) , 10.1074/JBC.271.15.8599
Simon T. Schäfer, Sophia Gessner, André Scherag, Katharina Rump, Ulrich H. Frey, Winfried Siffert, Astrid M. Westendorf, Jörg Steinmann, Jürgen Peters, Michael Adamzik, Hydrocortisone Fails to Abolish NF-κB1 Protein Nuclear Translocation in Deletion Allele Carriers of the NFKB1 Promoter Polymorphism (-94ins/delATTG) and Is Associated with Increased 30-Day Mortality in Septic Shock PLOS ONE. ,vol. 9, ,(2014) , 10.1371/JOURNAL.PONE.0104953