Genetic determinants of cardiovascular disease : heritability and genetic risk score

作者: Elias Levy Itshak Salfati

DOI:

关键词: DiseaseRisk factorBioinformaticsGenome-wide association studyGenetic architectureSingle-nucleotide polymorphismRisk assessmentGenetic associationPathologyHeritabilityMedicine

摘要: Complex diseases such as cardiovascular disease (CVD) are influenced by both genetic and environmental factors. Estimation of an individual’s risk usually involves measurement factors correlated with CVD (e.g. age, sex, smoking, blood pressure, total cholesterol). Lately, several biomarkers have been evaluated for their ability to improve prediction beyond traditional The interest in novel loci is propelled notably emerging discoveries from the advent genome-Wide association studies (GWAS) variants associated common diseases. GWAS has greatly enhanced our knowledge architecture disease, yielding over 50 confirmed be date, well 200 lipids, body mass index, type 2 diabetes mellitus). This recent continuing success discovering increasing numbers robustly markers led reassessment whether data can provide clinically useful information refining moderating through a more efficient application prevention strategies. In this thesis, we first address approach survey hypertension (i.e. major factor premature CVD), then construct models coronary artery (CAD; i.e. most CVD) finally establish basis strongest predictor clinical complications CAD, subclinical atherosclerosis, add incremental prognostic value above scores across range ages. We show that, visit measurements, heritability ~25%/~45% ~30%/~37% systolic (SBP) diastolic pressure (DBP) European (N=8,901) African (N=2,860) ancestry individuals Atherosclerosis Risk Communities (ARIC) cohort, respectively, accord prior studies. Then present means combine polygenic score - effects among ensemble independent assessment using log-Link function. apply method heart (CHD) ARIC cohort. addition (GRS) (CRS) improves discrimination calibration CHD subsequently reveal how influences thus potentially management. Finally, Among 1561 cases 5068 controls, datasets available NCBI's database Genotypes Phenotypes (dbGAP), found one SD increase 49 CAD SNPs was 28% increased having advanced atherosclerosis (p = 1.43 x 10-16). significant every 15-Year age stratum (.01 > p 9.4 10-7) remarkably similar all strata test heterogeneity 0.98). obtained near identical results levels significance when restricted 32 not Accordingly, variation largely recapitulates known traits. vast majority varies chromosome, depending on its length, concentrated intronic intergenic regions genome but widely distributed allele frequency spectrum. Respectively, proposed at established susceptibility nongenetic tool facilitates standardized incorporation GRS assessment. (...)

参考文章(189)
Carlos Iribarren, Alan S. Go, Gail Husson, Stephen Sidney, Joan M. Fair, Thomas Quertermous, Mark A. Hlatky, Stephen P. Fortmann, Metabolic Syndrome and Early-Onset Coronary Artery Disease: Is the Whole Greater Than Its Parts? Journal of the American College of Cardiology. ,vol. 48, pp. 1800- 1807 ,(2006) , 10.1016/J.JACC.2006.03.070
Raimund Erbel, Stefan Möhlenkamp, Susanne Moebus, Axel Schmermund, Nils Lehmann, Andreas Stang, Nico Dragano, Dietrich Grönemeyer, Rainer Seibel, Hagen Kälsch, Martina Bröcker-Preuss, Klaus Mann, Johannes Siegrist, Karl-Heinz Jöckel, Heinz Nixdorf Recall Study Investigative Group, Coronary risk stratification, discrimination, and reclassification improvement based on quantification of subclinical coronary atherosclerosis: the Heinz Nixdorf Recall study. Journal of the American College of Cardiology. ,vol. 56, pp. 1397- 1406 ,(2010) , 10.1016/J.JACC.2010.06.030
Yadon Arad, Kenneth J. Goodman, Marguerite Roth, David Newstein, Alan D. Guerci, Coronary calcification, coronary disease risk factors, C-reactive protein, and atherosclerotic cardiovascular disease events: the St. Francis Heart Study. Journal of the American College of Cardiology. ,vol. 46, pp. 158- 165 ,(2005) , 10.1016/J.JACC.2005.02.088
Matthew J. Budoff, Leslee J. Shaw, Sandy T. Liu, Steven R. Weinstein, Philip H. Tseng, Ferdinand R. Flores, Tracy Q. Callister, Paolo Raggi, Daniel S. Berman, Tristen P. Mosler, Long-Term Prognosis Associated With Coronary Calcification: Observations From a Registry of 25,253 Patients Journal of the American College of Cardiology. ,vol. 49, pp. 1860- 1870 ,(2007) , 10.1016/J.JACC.2006.10.079
Suzette E. Elias-Smale, Rozemarijn Vliegenthart Proença, Michael T. Koller, Maryam Kavousi, Frank J.A. van Rooij, Myriam G. Hunink, Ewout W. Steyerberg, Albert Hofman, Matthijs Oudkerk, Jacqueline C.M. Witteman, Coronary calcium score improves classification of coronary heart disease risk in the elderly: the Rotterdam study Journal of the American College of Cardiology. ,vol. 56, pp. 1407- 1414 ,(2010) , 10.1016/J.JACC.2010.06.029
James H. Rudd, John R. Davies, Peter L. Weissberg, Molecular and Metabolic Imaging of Atherosclerosis The Journal of Nuclear Medicine. ,vol. 45, pp. 1898- 1907 ,(2004)
Lewis Wexler, Bruce Brundage, John Crouse, Robert Detrano, Valentin Fuster, Jamshid Maddahi, John Rumberger, William Stanford, Richard White, Kathryn Taubert, Coronary artery calcification: pathophysiology, epidemiology, imaging methods, and clinical implications. A statement for health professionals from the American Heart Association. Writing Group. Circulation. ,vol. 94, pp. 1175- 1192 ,(1996) , 10.1161/01.CIR.94.5.1175
Steven J. Schrodi, Shubhabrata Mukherjee, Ying Shan, Gerard Tromp, John J. Sninsky, Amy P. Callear, Tonia C. Carter, Zhan Ye, Jonathan L. Haines, Murray H. Brilliant, Paul K. Crane, Diane T. Smelser, Robert C. Elston, Daniel E. Weeks, Genetic-based prediction of disease traits: prediction is very difficult, especially about the future. Frontiers in Genetics. ,vol. 5, pp. 162- 162 ,(2014) , 10.3389/FGENE.2014.00162
William Ollier, Tim Sprosen, Tim Peakman, UK Biobank: from concept to reality Pharmacogenomics. ,vol. 6, pp. 639- 646 ,(2005) , 10.2217/14622416.6.6.639