Applying data mining techniques for spatial distribution analysis of plant species co-occurrences

作者: Luís Alexandre Estevão Silva , Marinez Ferreira Siqueira , Flávia dos Santos Pinto , Felipe Sodré M. Barros , Geraldo Zimbrão

DOI: 10.1016/J.ESWA.2015.08.031

关键词: Identification (information)Association rule learningData miningResource (project management)Forest dynamicsEcology (disciplines)Knowledge extractionComputer scienceProcess (engineering)

摘要: We used association rules for extracting patterns of co-occurrences.We obtained pairs and groups species with positive negative correlation.One multiscale, spatially explicit multi-species method was proposed.Data mining can be useful to produce lists co-occurrences. The continuous growth biodiversity databases has led a search techniques that assist researchers. This paper presents the analysis occurrences aims identify in co-occurrences through application data mining. propose, implement evaluate tool help ecologists formulate validate hypotheses regarding co-occurrence between two or more species. To our approach, we analyzed occurrence dataset from 50-ha Forest Dynamics Project on Barro Colorado Island (BCI). Three case studies were developed based this tropical forest correlation. Our point multi-scale form multi-species, simultaneously, accelerating identification process Spatial Point Pattern Analysis. demonstrates mining, which been successfully applications such as business consumer profile analysis, resource ecology.

参考文章(65)
RS Bivand, Virgilio Gomez-Rubio, EJ Pebesma, Applied Spatial Data Analysis with R. Springer Springer. ,(2008)
David Nettleton, CRM – Customer Relationship Management and Analysis Commercial Data Mining#R##N#Processing, Analysis and Modeling for Predictive Analytics Projects. pp. 195- 208 ,(2014) , 10.1016/B978-0-12-416602-8.00013-3
Philip S. Yu, Charu C. Aggarwal, Yuchen Zhao, On Clustering Graph Streams. siam international conference on data mining. pp. 478- 489 ,(2010)
Yanchang Zhao, Yonghua Cen, Data Mining Applications with R ,(2014)
Charu C. Aggarwal, Data Mining: The Textbook ,(2015)
Joseph A. Veech, A probabilistic model for analysing species co-occurrence Global Ecology and Biogeography. ,vol. 22, pp. 252- 260 ,(2013) , 10.1111/J.1466-8238.2012.00789.X
Roger S Bivand, Edzer J Pebesma, Virgilio Gómez-Rubio, Edzer Jan Pebesma, None, Applied spatial data analysis with R Springer. ,(2013) , 10.1007/978-1-4614-7618-4
Vipin Kumar, Pang-Ning Tan, Michael M. Steinbach, Introduction to Data Mining ,(2013)
Adrian Baddeley, Rolf Turner, spatstat: An R Package for Analyzing Spatial Point Patterns Journal of Statistical Software. ,vol. 12, pp. 1- 42 ,(2005) , 10.18637/JSS.V012.I06
Matteo Detto, Helene C. Muller-Landau, Fitting Ecological Process Models to Spatial Patterns Using Scalewise Variances and Moment Equations The American Naturalist. ,vol. 181, ,(2013) , 10.1086/669678