Bioinformatics Tools to Assist Breeding for Climate Change
作者： David Edwards , None
DOI: 10.1007/978-3-642-37045-8_10
关键词: Phenomics 、 Genomics 、 Sustainability 、 Omics 、 Genome 、 DNA sequencing 、 Environmental science 、 Food security 、 Population 、 Bioinformatics
摘要: Major advances have been made in the various “omics” fields recent years, driven by new genomics technology, particularly DNA sequencing and high-throughput genotyping. The ability to interrogate genome of diverse organisms enables characterization allelic variants underlying important agronomic traits. Advances bioinformatics support analysis genomic data flood, applied informatics has grown rapidly over years parallel with expansion genomics. As we face perfect storm increasing population climatic variation, genomics, phenomics related research, supported bioinformatics, offer greatest potential for accelerating food production sustainability. An number crop genomes are being sequenced, large-scale diversity studies, performed at whole level, undertaken major crops. this is facilitated customized databases, statistical methods visualization tools. Through integration interrogation application these resources improvement, maintain improve security during a period climate variability.
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Jacqueline Batley, Erica Jewell, David Edwards, Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers. Methods of Molecular Biology. ,vol. 406, pp. 473- 494 ,(2007) , 10.1007/978-1-59745-535-0_23
Michael Imelfort, Jacqueline Batley, Sean Grimmond, David Edwards, Genome sequencing approaches and successes. Methods of Molecular Biology. ,vol. 513, pp. 345- 358 ,(2009) , 10.1007/978-1-59745-427-8_18
Jacqueline Batley, David Edwards, Mining for SNPs and SSRs Using SNPServer, dbSNP and SSR Taxonomy Tree Methods in Molecular Biology. ,vol. 537, pp. 303- 321 ,(2009) , 10.1007/978-1-59745-251-9_15
Nikki Appleby, David Edwards, Jacqueline Batley, New Technologies for Ultra-High Throughput Genotyping in Plants Methods of Molecular Biology. ,vol. 513, pp. 19- 39 ,(2009) , 10.1007/978-1-59745-427-8_2
David Edwards, David Hansen, Jason E. Stajich, DNA Sequence Databases Bioinformatics. pp. 1- 11 ,(2009) , 10.1007/978-0-387-92738-1_1
Erica Logan, Christopher G Love, David Edwards, Jennifer C Mortimer, Jacqueline Batley, Simple sequence repeat (SSR) and GC distribution in the Arabidopsis thaliana genome. Journal of Plant Biotechnology. ,vol. 7, pp. 17- 25 ,(2005)
Chris Duran, David Edwards, Jacqueline Batley, Genetic maps and the use of synteny. Methods of Molecular Biology. ,vol. 513, pp. 41- 55 ,(2009) , 10.1007/978-1-59745-427-8_3
Bioinformatics for DNA Sequence Analysis Methods of Molecular Biology. ,vol. 537, ,(2009) , 10.1007/978-1-59745-251-9
David Edwards, John W. Forster, Noel O. I. Cogan, Jacqueline Batley, David Chagné, Single Nucleotide Polymorphism Discovery Association Mapping in Plants. pp. 53- 76 ,(2007) , 10.1007/978-0-387-36011-9_4
P. K. Gupta, M. Prasad, J. K. Roy, Single nucleotide polymorphisms (SNPs): a new paradigm in molecular marker technology and DNA polymorphism detection with emphasis on their use in plants Current Science Association. ,(2001)