Ensembl: A Genome Infrastructure

R. Guigo, E. T. Dermitzakis, P. Agarwal, C. P. Ponting, G. Parra, A. Reymond, J. F. Abril, E. Keibler, R. Lyle, C. Ucla, S. E. Antonarakis, M. R. Brent, Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes Proceedings of the National Academy of Sciences of the United States of America. ,vol. 100, pp. 1140- 1145 ,(2003) , 10.1073/PNAS.0337561100

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European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk Arkadiusz 3 Mongin Emmanuel 3 Rust Alistair G. 3 Slater Guy 3 Stabenau Arne 3 Ureta-Vidal Abel 3 Whelan Simon 3, Research Group in Biomedical Informatics Abril Josep F. 5 Guigó Roderic 5 Parra Genís 5, Bioinformatics Agarwal Pankaj 6, National Center for Biotechnology Information Agarwala Richa 7 Church Deanna M. 7 Hlavina Wratko 7 Maglott Donna R. 7 Sapojnikov Victor 7, Department of Mathematics Alexandersson Marina 8 Pachter Lior 8, Division of Medical Genetics Antonarakis Stylianos E. 9 Dermitzakis Emmanouil T. 9 Reymond Alexandre 9 Ucla Catherine 9, Center for Biomolecular Science and Engineering Baertsch Robert 10 Diekhans Mark 10 Furey Terrence S. 10 Hinrichs Angela 10 Hsu Fan 10 Karolchik Donna 10 Kent W. James 10 Roskin Krishna M. 10 Schwartz Matthias S. 10 Sugnet Charles 10 Weber Ryan J. 10, EMBL Bork Peer 11 Letunic Ivica 11 Suyama Mikita 11 Torrents David 11 Zdobnov Evgeny M. 11, UK MRC Mouse Sequencing Consortium Botcherby Marc 12 Brown Stephen D. 12 Campbell Robert D. 12 Jackson Ian 12, Lawrence Berkeley National Laboratory Bray Nicolas 13 Couronne Olivier 13 Dubchak Inna 13 Poliakov Alex 13 Rubin Edward M. 13, Department of Computer Science Brent Michael R. 14 Flicek Paul 14 Keibler Evan 14 Korf Ian 14, School of Computer Science Batalov S. 15, Jackson Laboratory Bult Carol 16 Frankel Wayne N. 16, Laboratory for Genome Exploration Carninci Piero 17 Hayashizaki Yoshihide 17 Kawai Jun 17 Okazaki Yasushi 17, Affymetrix Inc. Cawley Simon 18 Kulp David 18 Wheeler Raymond 18, Departments of Statistics and Health Evaluation Sciences Chiaromonte Francesca 19, National Human Genome Research Institute Collins Francis S. 20 Felsenfeld Adam 20 Guyer Mark 20 Peterson Jane 20 Wetterstrand Kris 20, Wellcome Trust Centre for Human Genetics Copley Richard R. 21 Mott Richard 21, Department of Electrical Engineering Dewey Colin 22, Department of Human Anatomy and Genetics Dickens Nicholas J. 23 Emes Richard D. 23 Goodstadt Leo 23 Ponting Chris P. 23 Winter Eitan 23, Department of Human Genetics Dunn Diane M. 24 von Niederhausern Andrew C. 24 Weiss Robert B. 24, Howard Hughes Medical Institute and Department of Genetics Eddy Sean R. 25 Johnson L. Steven 25 Jones Thomas A. 25, Departments of Biochemistry and Molecular Biology and Computer Science and Engineering Elnitski Laura 26 Kolbe Diana L. 26, Department of Computer Science and Engineering Eswara Pallavi 27 Miller Webb 27 O'Connor Michael J. 27 Schwartz Scott 27, Baylor College of Medicine Gibbs Richard A. 28 Muzny Donna M. 28, Institute for Systems Biology Glusman Gustavo 29 Smit Arian 29, National Human Genome Research Institute Green Eric D. 30, Department of Biochemistry and Molecular Biology Hardison Ross C. 31 Yang Shan 31, Howard Hughes Medical Institute Haussler David 32, Department of Chemistry and Biochemistry Hua Axin 33 Roe Bruce A. 33, Departments of Genetics and Medicine and Harvard-Partners Center for Genetics and Genomics Kucherlapati Raju S. 34 Montgomery Kate T. 34, Department of Statistics Li Jia 35, Department of Computer Science Li Ming 36, US DOE Joint Genome Institute Lucas Susan 37, Department of Computer Science Ma Bin 38, Cold Spring Harbor Laboratory McCombie W. Richard 39, Wellcome Trust Morgan Michael 40, Department of Computer Science and Engineering Pevzner Pavel 41 Tesler Glenn 41, Max Planck Institute for Molecular Genetics Schultz Jörg 42, Genome Therapeutics Corporation Smith Douglas R. 43, Bioinformatics Solutions Inc. Tromp John 44, Department of Molecular and Human Genetics Worley Kim C. 45, Department of Biology Lander Eric S. lander@ genome. wi. mit. edu 2 46 b, None, Initial sequencing and comparative analysis of the mouse genome. Nature. ,vol. 420, pp. 520- 562 ,(2002) , 10.1038/NATURE01262

US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki Paul 4 Richardson Paul 4 Wenning Sarah 4 Slezak Tom 4 Doggett Norman 4 Cheng Jan-Fang 4 Olsen Anne 4 Lucas Susan 4 Elkin Christopher 4 Uberbacher Edward 4 Frazier Marvin 4, RIKEN Genomic Sciences Center: Sakaki Yoshiyuki 9 Fujiyama Asao 9 Hattori Masahira 9 Yada Tetsushi 9 Toyoda Atsushi 9 Itoh Takehiko 9 Kawagoe Chiharu 9 Watanabe Hidemi 9 Totoki Yasushi 9 Taylor Todd 9, Genoscope and CNRS UMR-8030: Weissenbach Jean 10 Heilig Roland 10 Saurin William 10 Artiguenave Francois 10 Brottier Philippe 10 Bruls Thomas 10 Pelletier Eric 10 Robert Catherine 10 Wincker Patrick 10, Department of Genome Analysis, Institute of Molecular Biotechnology: Rosenthal André 12 Platzer Matthias 12 Nyakatura Gerald 12 Taudien Stefan 12 Rump Andreas 12, GTC Sequencing Center: Smith Douglas R. 11 Doucette-Stamm Lynn 11 Rubenfield Marc 11 Weinstock Keith 11 Lee Hong Mei 11 Dubois JoAnn 11, Beijing Genomics Institute/Human Genome Center: Yang Huanming 13 Yu Jun 13 Wang Jian 13 Huang Guyang 14 Gu Jun 15, Multimegabase Sequencing Center, The Institute for Systems Biology: Hood Leroy 16 Rowen Lee 16 Madan Anup 16 Qin Shizen 16, Stanford Genome Technology Center: Davis Ronald W. 17 Federspiel Nancy A. 17 Abola A. Pia 17 Proctor Michael J. 17, University of Oklahoma's Advanced Center for Genome Technology: Roe Bruce A. 22 Chen Feng 22 Pan Huaqin 22, Max Planck Institute for Molecular Genetics: Ramser Juliane 23 Lehrach Hans 23 Reinhardt Richard 23, Cold Spring Harbor Laboratory, Lita Annenberg Hazen Genome Center: McCombie W. Richard 24 de la Bastide Melissa 24 Dedhia Neilay 24, GBF—German Research Centre for Biotechnology: Blöcker Helmut 25 Hornischer Klaus 25 Nordsiek Gabriele 25, Scientific management: National Human Genome Research Institute, US National Institutes of Health: Collins Francis fc23a@ nih. gov 46 b Guyer Mark S. 46 Peterson Jane 46 Felsenfeld Adam 46 Wetterstrand Kris A. 46, Stanford Human Genome Center: Myers Richard M. 18 Schmutz Jeremy 18 Dickson Mark 18 Grimwood Jane 18 Cox David R. 18, University of Washington Genome Center: Olson Maynard V. 19 Kaul Rajinder 19 Raymond Christopher 19, Department of Molecular Biology, Keio University School of Medicine: Shimizu Nobuyoshi 20 Kawasaki Kazuhiko 20 Minoshima Shinsei 20, University of Texas Southwestern Medical Center at Dallas: Evans Glen A. 21 49 50 49 Athanasiou Maria 21 Schultz Roger 21, Office of Science, US Department of Energy: Patrinos Aristides 47, Wellcome Trust: Morgan Michael J. 48, None, Initial sequencing and analysis of the human genome. Nature. ,vol. 409, pp. 860- 921 ,(2001) , 10.1038/35057062