Eumycetozoa = Amoebozoa?: SSUrDNA Phylogeny of Protosteloid Slime Molds and Its Significance for the Amoebozoan Supergroup

作者: Lora L. Shadwick , Frederick W. Spiegel , John D. L. Shadwick , Matthew W. Brown , Jeffrey D. Silberman

DOI: 10.1371/JOURNAL.PONE.0006754

关键词: AmoebozoaBotanyPhylogenetic treeEvolutionary biologyMycetozoaMonophylyProtosteloidBiologyMulticellular organismSlime moldPhylogeneticsGeneral Biochemistry, Genetics and Molecular BiologyGeneral Agricultural and Biological SciencesGeneral Medicine

摘要: Amoebae that make fruiting bodies consisting of a stalk and spores classified as closely related to the myxogastrids have classically been placed in taxon Eumycetozoa. Traditionally, there are three groups comprising Eumycetozoa: myxogastrids, dictyostelids, so-called protostelids. Dictyostelids both multicellular may contain hundreds spores. Protostelids those amoebae simple one or few Protostelid-like organisms suggested progenitors they used formulate hypotheses on evolution within group. Molecular phylogenies published for but little molecular phylogenetic work has done Here we provide trees based small subunit ribosomal RNA gene (SSU) include 21 protostelids along with publicly available sequences from wide variety other eukaryotes. SSU recover seven well supported clades do not appear be specifically another often interspersed among established never reported fruit. In fact, show at least two taxa unambiguously belong amoebozoan lineages where reported. These analyses indicate can reject monophyletic Eumycetozoa, s.l. For this reason, will hereafter refer slime molds protosteloid and/or molds, results add our understanding biodiversity, demonstrate paradigms nonfruiting sporulating must integrated. Finally, suggest strategies future research amoebae, discuss impact taxonomists phylogenomicists.

参考文章(89)
ANNE‐MARIE FIORE‐DONNO, Cédric Berney, Jan Pawlowski, Sandra L Baldauf, None, Higher‐Order Phylogeny of Plasmodial Slime Molds (Myxogastria) Based on Elongation Factor 1‐A and Small Subunit rRNA Gene Sequences Journal of Eukaryotic Microbiology. ,vol. 52, pp. 201- 210 ,(2005) , 10.1111/J.1550-7408.2005.00032.X
Wayne P. Maddison, David R. Maddison, MacClade 4 : analysis of phylogeny and character evolution Computer Software and User's Manual. ,(2005)
Frederick W. Spiegel, Lora A. Lindley, Sally M. Edwards, Variations in nucleolar morphology in Eumycetozoans Revista Mexicana de Micología. ,vol. 23, pp. 75- 81 ,(2006)
Alexander Kudryavtsev, Detlef Bernhard, Martin Schlegel, Ema EY Chao, Thomas Cavalier-Smith, 18S ribosomal RNA gene sequences of Cochliopodium (Himatismenida) and the phylogeny of Amoebozoa. Protist. ,vol. 156, pp. 215- 224 ,(2005) , 10.1016/J.PROTIS.2005.03.003
Leigh C Latta, Jeremy W Bakelar, Roland A Knapp, Michael E Pfrender, Rapid evolution in response to introduced predators II: the contribution of adaptive plasticity. BMC Evolutionary Biology. ,vol. 7, pp. 21- 21 ,(2007) , 10.1186/1471-2148-7-21
F. W. Spiegel, J. Feldman, W. E. Bennett, Ultrastructure and development of the amoebo-flagellate cells of the protostelidProtosporangium articulatum Protoplasma. ,vol. 132, pp. 115- 128 ,(1986) , 10.1007/BF01276991
F. W. Spiegel, S. B. Lee, S. A. Rusk, Eumycetozoans and molecular systematics Canadian Journal of Botany. ,vol. 73, pp. 738- 746 ,(1995) , 10.1139/B95-317
JAN PAWLOWSKI, FABIEN BURKI, Untangling the phylogeny of amoeboid protists. Journal of Eukaryotic Microbiology. ,vol. 56, pp. 16- 25 ,(2009) , 10.1111/J.1550-7408.2008.00379.X
Alexander Kudryavtsev, Claudia Wylezich, Martin Schlegel, Julia Walochnik, Rolf Michel, Ultrastructure, SSU rRNA Gene Sequences and Phylogenetic Relationships of Flamella Schaeffer, 1926 (Amoebozoa), with Description of Three New Species Protist. ,vol. 160, pp. 21- 40 ,(2009) , 10.1016/J.PROTIS.2008.09.004