Draft genome sequence of Lactobacillus casei W56.
作者： Kerstin Hochwind , Thomas Weinmaier , Michael Schmid , Saskia van Hemert , Anton Hartmann
DOI: 10.1128/JB.01386-12
关键词: Biology 、 Probiotic 、 Lactobacillus casei 、 Strain (biology) 、 Contig 、 Microbiology 、 Genetics 、 Ingredient 、 Whole genome sequencing
摘要: ABSTRACT We announce the draft genome sequence of Lactobacillus casei W56 in one contig. This strain shows immunomodulatory and probiotic properties. The is also an ingredient commercially available products.
researchgate.net 
sci-hub.se 参考文章(15)
Mihai Pop, Adam Phillippy, Arthur L Delcher, Steven L Salzberg, Comparative genome assembly Briefings in Bioinformatics. ,vol. 5, pp. 237- 248 ,(2004) , 10.1093/BIB/5.3.237
Sam Griffiths-Jones, Simon Moxon, Mhairi Marshall, Ajay Khanna, Sean R Eddy, Alex Bateman, Rfam: annotating non-coding RNAs in complete genomes Nucleic Acids Research. ,vol. 33, pp. 121- 124 ,(2004) , 10.1093/NAR/GKI081
Karin Lagesen, Peter Hallin, Einar Andreas Rødland, Hans-Henrik Stærfeldt, Torbjørn Rognes, David W. Ussery, RNAmmer: consistent and rapid annotation of ribosomal RNA genes Nucleic Acids Research. ,vol. 35, pp. 3100- 3108 ,(2007) , 10.1093/NAR/GKM160
J. H. Badger, G. J. Olsen, CRITICA: coding region identification tool invoking comparative analysis Molecular Biology and Evolution. ,vol. 16, pp. 512- 524 ,(1999) , 10.1093/OXFORDJOURNALS.MOLBEV.A026133
S Altschula, Warren Gisha, Webb Millerb, E Meyersc, D Lipmana, None, Basic Local Alignment Search Tool Journal of Molecular Biology. ,vol. 215, pp. 403- 410 ,(1990) , 10.1016/S0022-2836(05)80360-2
Harro M. Timmerman, Laetitia E.M. Niers, Ben U. Ridwan, Catherina J.M. Koning, Linda Mulder, Louis M.A. Akkermans, Frans M. Rombouts, Ger T. Rijkers, Design of a multispecies probiotic mixture to prevent infectious complications in critically ill patients Clinical Nutrition. ,vol. 26, pp. 450- 459 ,(2007) , 10.1016/J.CLNU.2007.04.008
David L Wheeler, Deanna M Church, Ron Edgar, Scott Federhen, Wolfgang Helmberg, Thomas L Madden, Joan U Pontius, Gregory D Schuler, Lynn M Schriml, Edwin Sequeira, Tugba O Suzek, Tatiana A Tatusova, Lukas Wagner, None, Database resources of the National Center for Biotechnology Information: update Nucleic Acids Research. ,vol. 32, pp. 35D- 40 ,(2004) , 10.1093/NAR/GKH073
Arthur L. Delcher, Kirsten A. Bratke, Edwin C. Powers, Steven L. Salzberg, Identifying bacterial genes and endosymbiont DNA with Glimmer Bioinformatics. ,vol. 23, pp. 673- 679 ,(2007) , 10.1093/BIOINFORMATICS/BTM009
Sarah Hunter, Philip Jones, Alex Mitchell, Rolf Apweiler, Teresa K Attwood, Alex Bateman, Thomas Bernard, David Binns, Peer Bork, Sarah Burge, Edouard De Castro, Penny Coggill, Matthew Corbett, Ujjwal Das, Louise Daugherty, Lauranne Duquenne, Robert D Finn, Matthew Fraser, Julian Gough, Daniel Haft, Nicolas Hulo, Daniel Kahn, Elizabeth Kelly, Ivica Letunic, David Lonsdale, Rodrigo Lopez, Martin Madera, John Maslen, Craig McAnulla, Jennifer McDowall, Conor McMenamin, Huaiyu Mi, Prudence Mutowo-Muellenet, Nicola Mulder, Darren Natale, Christine Orengo, Sebastien Pesseat, Marco Punta, Antony F Quinn, Catherine Rivoire, Amaia Sangrador-Vegas, Jeremy D Selengut, Christian JA Sigrist, Maxim Scheremetjew, John Tate, Manjulapramila Thimmajanarthanan, Paul D Thomas, Cathy H Wu, Corin Yeats, Siew-Yit Yong, None, InterPro in 2011: new developments in the family and domain prediction database Nucleic Acids Research. ,vol. 40, pp. 4725- 4725 ,(2012) , 10.1093/NAR/GKR948
L. Ai, C. Chen, F. Zhou, L. Wang, H. Zhang, W. Chen, B. Guo, Complete Genome Sequence of the Probiotic Strain Lactobacillus casei BD-II Journal of Bacteriology. ,vol. 193, pp. 3160- 3161 ,(2011) , 10.1128/JB.00421-11