Loop closure and intersubunit communication in tryptophan synthase.

作者: Thomas R. Schneider , Eva Gerhardt , Minsu Lee , Po-Huang Liang , Karen S. Anderson

DOI: 10.1021/BI9728957

关键词:

摘要: Crystal structures of wild-type tryptophan synthase α2β2 complexes from Salmonella typhimurium were determined to investigate the mechanism allosteric activation α-reaction by aminoacrylate intermediate formed at β-active site. Using a flow cell, (A-A) β-reaction ( ) was generated in crystal under steady state conditions presence serine and α-site inhibitor 5-fluoroindole propanol phosphate (F-IPP). A model for conformation Schiff base between β-subunit cofactor pyridoxal (PLP) is presented. The structure compared with enzyme absence (TRPS) (TRPSF-IPP) F-IPP. detailed binding F-IPP α-subunit In contrast findings Hyde et al. [(1988) J. Biol. Chem. 263,17857−17871] Rhee [(1997) Biochemistry 36, 7664−7680], we find that an alone ligand sufficient loop αL...

参考文章(18)
Jian-Sheng Jiang, Axel T. Brünger, Protein hydration observed by X-ray diffraction. Solvation properties of penicillopepsin and neuraminidase crystal structures. Journal of Molecular Biology. ,vol. 243, pp. 100- 115 ,(1994) , 10.1006/JMBI.1994.1633
William H. Matchett, Indole Channeling by Tryptophan Synthase of Neurospora Journal of Biological Chemistry. ,vol. 249, pp. 4041- 4049 ,(1974) , 10.1016/S0021-9258(19)42481-2
A Mozzarelli, A Peracchi, G L Rossi, S A Ahmed, E W Miles, Microspectrophotometric studies on single crystals of the tryptophan synthase alpha 2 beta 2 complex demonstrate formation of enzyme-substrate intermediates. Journal of Biological Chemistry. ,vol. 264, pp. 15774- 15780 ,(1989) , 10.1016/S0021-9258(18)71544-5
J.A. Demoss, Studies on the mechanism of the tryptophan synthetase reaction Biochimica et Biophysica Acta. ,vol. 62, pp. 279- 293 ,(1962) , 10.1016/0006-3002(62)90041-0
Frances C. Bernstein, Thomas F. Koetzle, Graheme J.B. Williams, Edgar F. Meyer, Michael D. Brice, John R. Rodgers, Olga Kennard, Takehiko Shimanouchi, Mitsuo Tasumi, The Protein Data Bank: a computer-based archival file for macromolecular structures. Journal of Molecular Biology. ,vol. 112, pp. 535- 542 ,(1977) , 10.1016/S0022-2836(77)80200-3
Harold W. Wyckoff, Marilynn Doscher, Demetrius Tsernoglou, Tadashi Inagami, Louise N. Johnson, Karl D. Hardman, Norma M. Allewell, David M. Kelly, Frederic M. Richards, Design of a diffractometer and flow cell system for X-ray analysis of crystalline proteins with applications to the crystal chemistry of ribonuclease-S. Journal of Molecular Biology. ,vol. 27, pp. 563- 578 ,(1967) , 10.1016/0022-2836(67)90059-9
Liisa Holm, Chris Sander, Protein Structure Comparison by Alignment of Distance Matrices Journal of Molecular Biology. ,vol. 233, pp. 123- 138 ,(1993) , 10.1006/JMBI.1993.1489