The nucleotide sequence of apple stem grooving capillovirus genome
作者： Nobuyuki Yoshikawa , Eimi Sasaki , Motohiro Kato , Tsuyoshi Takahashi
DOI: 10.1016/0042-6822(92)90170-T
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摘要: Abstract The complete nucleotide sequence of apple stem grooving virus (ASGV) genome has been determined. is 6496 nucleotides in length excluding a 3′-terminal poly(A) tail and contains two overlapping open reading frames (ORFs). ORF1 begins at position 37 terminated 6341, encoding protein with molecular weight 241 kDa. ORF2, which different frame within ORF1, 4788 can encode 36-kDa protein. 241-kDa consensus sequences associated the RNA-dependent RNA polymerase NTP-binding helicase. Comparisons amino acid around these conserved motifs other viruses revealed that ASGV extensive similarities chlorotic leaf spot, tymo-, carla-, potexviruses, member sindbis-like supergroup. coat found to be located C-terminal region polyprotein. encoded by ORF2 Gly-Asp-Ser-Gly active site several cellular viral serine proteases.
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Alexander E. Gorbalenya, Alexei P. Donchenko, Vladimir M. Blinov, Eugene V. Koonin, Cysteine proteases of positive strand RNA viruses and chymotrypsin-like serine proteases. A distinct protein superfamily with a common structural fold. FEBS Letters. ,vol. 243, pp. 103- 114 ,(1989) , 10.1016/0014-5793(89)80109-7
C. M. Fauquet, F. Brown, R. I. B. Francki, D. L. Knudson, Classification and nomenclature of viruses. Fifth report of the International Committee on Taxonomy of Viruses. ,(1991)
H.A. Lütcke, K.C. Chow, F.S. Mickel, K.A. Moss, H.F. Kern, G.A. Scheele, Selection of AUG initiation codons differs in plants and animals. The EMBO Journal. ,vol. 6, pp. 43- 48 ,(1987) , 10.1002/J.1460-2075.1987.TB04716.X
L. F. SALAZAR, B. D. HARRISON, Host range, purification and properties of potato virus T Annals of Applied Biology. ,vol. 89, pp. 223- 235 ,(1978) , 10.1111/J.1744-7348.1978.TB07694.X
Shou-Wei Ding, Paul Keese, Adrian Gibbs, Nucleotide sequence of the ononis yellow mosaic tymovirus genome Virology. ,vol. 172, pp. 555- 563 ,(1989) , 10.1016/0042-6822(89)90198-0
Hugh R.B. Pelham, Synthesis and proteolytic processing of cowpea mosaic virus proteins in reticulocyte lysates Virology. ,vol. 96, pp. 463- 477 ,(1979) , 10.1016/0042-6822(79)90104-1
S. German, T. Candresse, M. Lanneau, J.C. Huet, J.C. Pernollet, J. Dunez, Nucleotide sequence and genomic organization of apple chlorotic leaf spot closterovirus. Virology. ,vol. 179, pp. 104- 112 ,(1990) , 10.1016/0042-6822(90)90279-Z
Steven Henikoff, Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene. ,vol. 28, pp. 351- 359 ,(1984) , 10.1016/0378-1119(84)90153-7
Maria Elena Osorio-Keese, Paul Keese, Adrian Gibbs, Nucleotide sequence of the genome of eggplant mosaic tymovirus Virology. ,vol. 172, pp. 547- 554 ,(1989) , 10.1016/0042-6822(89)90197-9
Ellen G. Strauss, Charles M. Rice, James H. Strauss, Complete Nucleotide Sequence of the Genomic RNA of Sindbis Virus Virology. ,vol. 133, pp. 92- 110 ,(1984) , 10.1016/0042-6822(84)90428-8