Evolutionary applications of MIRs and SINEs.
作者： F. Buchanan , A. Crawford , C. Strobeck , P. Palsbøll , Y. Plante
DOI: 10.1046/J.1365-2052.1999.00388.X
关键词:
摘要: It is believed that short interspersed elements (SINEs) are irreversibly inserted into genomes. We use this concept to try deduce the evolution of whales using sequence and hybridization studies. The observation microsatellites associated with SINEs lead us screen sequences surrounding cetacean for artiodactyl-derived SINEs. Two were thought be bovine SINE aligned comparison flanking from ungulates. was observed only in ruminants while CetSINE1 2 found mammals. Hybridization studies these three revealed all ungulates cetaceans strongest signal hippopotamus beluga; CetSINE2 hybridized ungulate suborders, Ruminantia. proposed putative not 'generic' but mammalian-wide repeats (MIRs). Caution urged: what initially appears a may instead MIR have reduced evolutionary resolving power.
core.ac.uk
narcis.nl参考文章(12)
Giovanni Zuliani, Helen H Hobbs, A high frequency of length polymorphisms in repeated sequences adjacent to Alu sequences American Journal of Human Genetics. ,vol. 46, pp. 963- 969 ,(1990)
Mitsuru Shimamura, Hiroshi Yasue, Kazuhiko Ohshima, Hideaki Abe, Hidehiro Kato, Toshiya Kishiro, Mutsuo Goto, Isao Munechika, Norihiro Okada, Molecular evidence from retroposons that whales form a clade within even-toed ungulates Nature. ,vol. 388, pp. 666- 670 ,(1997) , 10.1038/41759
Molecular evidence for the inclusion of cetaceans within the order Artiodactyla. Molecular Biology and Evolution. ,vol. 11, pp. 357- 364 ,(1994) , 10.1093/OXFORDJOURNALS.MOLBEV.A040118
Jaana Kaukinen, Sirkka-Liisa Varvio, Artiodactyl retroposons: association with microsatellites and use in SINEmorph detection by PCR Nucleic Acids Research. ,vol. 20, pp. 2955- 2958 ,(1992) , 10.1093/NAR/20.12.2955
Fiona C. Buchanan, Roger P. Littlejohn, Sue M. Galloway, Allan M. Crawford, Microsatellites and associated repetitive elements in the sheep genome. Mammalian Genome. ,vol. 4, pp. 258- 264 ,(1993) , 10.1007/BF00417432
David M. Irwin, �lfur �rnason, Cytochromeb gene of marine mammals: Phylogeny and evolution Journal of Mammalian Evolution. ,vol. 2, pp. 37- 55 ,(1994) , 10.1007/BF01464349
Arian F. A. Smit, Arthur D. Riggs, MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation Nucleic Acids Research. ,vol. 23, pp. 98- 102 ,(1995) , 10.1093/NAR/23.1.98
D. Kordis̆, F. Gubens̆ek, Horizontal SINE transfer between vertebrate classes Nature Genetics. ,vol. 10, pp. 131- 132 ,(1995) , 10.1038/NG0695-131
S Altschula, Warren Gisha, Webb Millerb, E Meyersc, D Lipmana, None, Basic Local Alignment Search Tool Journal of Molecular Biology. ,vol. 215, pp. 403- 410 ,(1990) , 10.1016/S0022-2836(05)80360-2
J. Gatesy, C. Hayashi, M. A. Cronin, P. Arctander, Evidence from milk casein genes that cetaceans are close relatives of hippopotamid artiodactyls. Molecular Biology and Evolution. ,vol. 13, pp. 954- 963 ,(1996) , 10.1093/OXFORDJOURNALS.MOLBEV.A025663