Metabolomics Identifies Multiple Candidate Biomarkers to Diagnose and Stage Human African Trypanosomiasis.

作者: Isabel M. Vincent , Rónán Daly , Bertrand Courtioux , Amy M. Cattanach , Sylvain Biéler

DOI: 10.1371/JOURNAL.PNTD.0005140

关键词:

摘要: Treatment for human African trypanosomiasis is dependent on the species of trypanosome causing disease and stage (stage 1 defined by parasites being present in blood lymphatics whilst 2, are found beyond blood-brain barrier cerebrospinal fluid (CSF)). Currently, staging relies upon detecting very low number or elevated white cell numbers CSF. Improved desirable, as elimination need lumbar puncture. Here we use metabolomics to probe samples CSF, plasma urine from 40 Angolan patients infected with Trypanosoma brucei gambiense, at different stages. Urine provided no robust markers indicative infection due inherent variability concentrations. Biomarkers CSF were able distinguish advanced 2 absolute specificity. Eleven metabolites clearly distinguished most two these (neopterin 5-hydroxytryptophan) showed 100% specificity sensitivity between our samples. Neopterin an inflammatory biomarker previously shown but not patients. 5-hydroxytryptophan important metabolite serotonin synthetic pathway, key pathway determining somnolence, thus offering a possible link eponymous symptoms “sleeping sickness”. Plasma also yielded several biomarkers presence (87% 95% specificity) (92% 81% specificity). A logistic regression model including clear separation either indeed diseased (both stages) versus control.

参考文章(61)
Rosette Megnekou, Jean Claude Djontu, Jude Daiga Bigoga, Fabrice Mbah Medou, Sandrine Tenou, Abel Lissom, Impact of Placental Plasmodium falciparum Malaria on the Profile of Some Oxidative Stress Biomarkers in Women Living in Yaoundé, Cameroon PLOS ONE. ,vol. 10, pp. e0134633- ,(2015) , 10.1371/JOURNAL.PONE.0134633
Federica Giordani, Roy Mwenechanya, Michael P. Barrett, Advances in Understanding and Treatment of Human African Trypanosomiasis: Divergent Diseases Caused by Distinct Parasites Handbook of Pharmacogenomics and Stratified Medicine. pp. 901- 917 ,(2014) , 10.1016/B978-0-12-386882-4.00039-6
Lloyd W Sumner, Alexander Amberg, Dave Barrett, Michael H Beale, Richard Beger, Clare A Daykin, Teresa W-M Fan, Oliver Fiehn, Royston Goodacre, Julian L Griffin, Thomas Hankemeier, Nigel Hardy, James Harnly, Richard Higashi, Joachim Kopka, Andrew N Lane, John C Lindon, Philip Marriott, Andrew W Nicholls, Michael D Reily, John J Thaden, Mark R Viant, et al., Proposed minimum reporting standards for chemical analysis Metabolomics. ,vol. 3, pp. 211- 221 ,(2007) , 10.1007/S11306-007-0082-2
Max Kuhn, Building Predictive Models in R Using the caret Package Journal of Statistical Software. ,vol. 28, pp. 1- 26 ,(2008) , 10.18637/JSS.V028.I05
Arpana Vaniya, Oliver Fiehn, Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics Trends in Analytical Chemistry. ,vol. 69, pp. 52- 61 ,(2015) , 10.1016/J.TRAC.2015.04.002
David Horn, Antigenic variation in African trypanosomes Molecular and Biochemical Parasitology. ,vol. 195, pp. 123- 129 ,(2014) , 10.1016/J.MOLBIOPARA.2014.05.001
Kyoko Hayashida, Kiichi Kajino, Lottie Hachaambwa, Boniface Namangala, Chihiro Sugimoto, None, Direct Blood Dry LAMP: A Rapid, Stable, and Easy Diagnostic Tool for Human African Trypanosomiasis PLOS Neglected Tropical Diseases. ,vol. 9, ,(2015) , 10.1371/JOURNAL.PNTD.0003578
M P Barrett, D W Boykin, R Brun, R R Tidwell, Human African trypanosomiasis: pharmacological re-engagement with a neglected disease British Journal of Pharmacology. ,vol. 152, pp. 1155- 1171 ,(2007) , 10.1038/SJ.BJP.0707354
Daniel C. Maddison, Flaviano Giorgini, The kynurenine pathway and neurodegenerative disease. Seminars in Cell & Developmental Biology. ,vol. 40, pp. 134- 141 ,(2015) , 10.1016/J.SEMCDB.2015.03.002
Natalia Tiberti, Alexandre Hainard, Veerle Lejon, Bertrand Courtioux, Enock Matovu, John Charles Enyaru, Xavier Robin, Natacha Turck, Krister Kristensson, Dieudonné Mumba Ngoyi, Gedeão M. L. Vatunga, Sanjeev Krishna, Philippe Büscher, Sylvie Bisser, Joseph Mathu Ndung’u, Jean-Charles Sanchez, Cerebrospinal Fluid Neopterin as Marker of the Meningo-Encephalitic Stage of Trypanosoma brucei gambiense Sleeping Sickness PLoS ONE. ,vol. 7, pp. e40909- ,(2012) , 10.1371/JOURNAL.PONE.0040909