Determination of enzyme/substrate specificity constants using a multiple substrate ESI-MS assay

作者: Na Pi , Julie A. Leary

DOI: 10.1016/J.JASMS.2003.10.009

关键词:

摘要: The traditional method used to investigate the reaction specificity of an enzyme with different substrates is perform individual kinetic measurements. In this case, a series varied concentrations are required study each substrate and non-regression analysis program several times obtain all constants for comparison. To avoid large amount experimental materials, long time, redundant data processing procedures involved in method, we have developed novel strategy rapid determination using one system containing multiple competing substrates. multiplex assay electrospray ionization mass spectrometry (ESI-MS) technique was simultaneous quantification products steady-state kinetics model established efficient constant calculation. investigated bacterial sulfotransferase NodH (NodST), which host specific nod gene product that catalyzes sulfate group transfer from 3′-phosphoadenosine 5′-phosphosulfate (PAPS) natural Nod factors or synthetic chitooligosaccharides. Herein, NodST four chitooligosaccharide acceptor chain length (chitobiose, chitotriose, chitotetraose, chitopentaose) determined by both measurements new ESI-MS assay. results obtained two methods were compared found be consistent. accurate valid evaluation, can evaluated

参考文章(36)
D W Ehrhardt, E M Atkinson, K F Faull, D I Freedberg, D P Sutherlin, R Armstrong, S R Long, In vitro sulfotransferase activity of NodH, a nodulation protein of Rhizobium meliloti required for host-specific nodulation. Journal of Bacteriology. ,vol. 177, pp. 6237- 6245 ,(1995) , 10.1128/JB.177.21.6237-6245.1995
Christopher T Walsh, Huawei Chen, Thomas A Keating, Brian K Hubbard, Heather C Losey, Lusong Luo, C.Gary Marshall, Deborah Ann Miller, Hiten M Patel, Tailoring enzymes that modify nonribosomal peptides during and after chain elongation on NRPS assembly lines Current Opinion in Chemical Biology. ,vol. 5, pp. 525- 534 ,(2001) , 10.1016/S1367-5931(00)00235-0
Yue-ming Qian, Wen-Chao Song, Correlation between PAP-dependent steroid binding activity and substrate specificity of mouse and human estrogen sulfotransferases. The Journal of Steroid Biochemistry and Molecular Biology. ,vol. 71, pp. 123- 131 ,(1999) , 10.1016/S0960-0760(99)00131-4
Michael D. Burkart, Masayuki Izumi, Eli Chapman, Chun-Hung Lin, Chi-Huey Wong, Regeneration of PAPS for the enzymatic synthesis of sulfated oligosaccharides. Journal of Organic Chemistry. ,vol. 65, pp. 5565- 5574 ,(2000) , 10.1021/JO000266O
Jianhui Rong, Hiroko Habuchi, Koji Kimata, Ulf Lindahl, Marion Kusche-Gullberg, Substrate specificity of the heparan sulfate hexuronic acid 2-O-sulfotransferase. Biochemistry. ,vol. 40, pp. 5548- 5555 ,(2001) , 10.1021/BI002926P
A. David Marshall, John F. Darbyshire, Ann P. Hunter, Peter McPhie, William B. Jakoby, Control of Activity through Oxidative Modification at the Conserved Residue Cys66 of Aryl Sulfotransferase IV Journal of Biological Chemistry. ,vol. 272, pp. 9153- 9160 ,(1997) , 10.1074/JBC.272.14.9153
Kevin Corbett, Anthony P. Fordham-Skelton, John A. Gatehouse, Benjamin G. Davis, Tailoring the substrate specificity of the β-glycosidase from the thermophilic archaeon Sulfolobus solfataricus☆ FEBS Letters. ,vol. 509, pp. 355- 360 ,(2001) , 10.1016/S0014-5793(01)03154-4
Hiroko Habuchi, Masayuki Tanaka, Osami Habuchi, Keiichi Yoshida, Hiroaki Suzuki, Kazuhiko Ban, Koji Kimata, The Occurrence of Three Isoforms of Heparan Sulfate 6-O-Sulfotransferase Having Different Specificities for Hexuronic Acid Adjacent to the TargetedN-Sulfoglucosamine Journal of Biological Chemistry. ,vol. 275, pp. 2859- 2868 ,(2000) , 10.1074/JBC.275.4.2859
E. M. Atkinson, M. M. Palcic, O. Hindsgaul, S. R. Long, Biosynthesis of Rhizobium meliloti lipooligosaccharide Nod factors: NodA is required for an N-acyltransferase activity. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 91, pp. 8418- 8422 ,(1994) , 10.1073/PNAS.91.18.8418
Russell P. Newton, Mark A. Bayliss, Jalal A. Khan, Abdolhossein Bastani, Adam C. R. Wilkins, David E. Games, Terence J. Walton, A. Gareth Brenton, Frank M. Harris, Kinetic analysis of cyclic CMP-specific and multifunctional phosphodiesterases by quantitative positive-ion fast-atom bombardment mass spectrometry. Rapid Communications in Mass Spectrometry. ,vol. 13, pp. 574- 584 ,(1999) , 10.1002/(SICI)1097-0231(19990415)13:7<574::AID-RCM526>3.0.CO;2-R