Molecular Characterization of Pathogenic Members of the Genus Fonsecaea Using Multilocus Analysis

作者: Jiufeng Sun , Mohammed J. Najafzadeh , Albertus H. G. Gerrits van den Ende , Vania A. Vicente , Peiying Feng

DOI: 10.1371/JOURNAL.PONE.0041512

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摘要: Members of the fungal genus Fonsecaea causing human chromoblastomycosis show substantial geographic structuring. Genetic identity clinical and environmental strains suggests transmission from plant debris, while evolutionary processes that have led to spatially separated populations remained unexplained. Sequences ITS, BT2, ACT1, Cdc42, Lac HmgA were analyzed, either by direct sequencing or cloning. Thirty-seven Central South America, Asia, Africa Europe sequenced possible recombination events calculated. Phylogenetic trees statistically supported, but BT2 ACT1 not. The Standardized Index Association (I(A) (S)) did not detect (S) = 0.4778), neither Phi-test for separate genes. In nubica non-synonymous mutations functional changes observed in gene, even though no selection pressures detected with neutrality test (Tajima D test, p>0.05). differentiation each gene showed separation American, African Asian populations. Strains vs. origin genetic distances comparable lower than found differentiation. conclusion, here we demonstrated clonality sibling species using multilocus data, structuring populations, a low structural selective constraint during evolution Fonsecaea.

参考文章(48)
Katja Sterflinger, Temperature and NaCl-tolerance of rock-inhabiting meristematic fungi. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology. ,vol. 74, pp. 271- 281 ,(1998) , 10.1023/A:1001753131034
Philippe Esterre, Abel Andriantsimahavandy, Estera Ramanantsoa Ramarcel, Jean-Louis Pecarrere, Forty Years of Chromoblastomycosis in Madagascar: A Review American Journal of Tropical Medicine and Hygiene. ,vol. 55, pp. 45- 47 ,(1996) , 10.4269/AJTMH.1996.55.45
Jorge P. Silva, Wanderley de Souza, Sonia Rozental, Chromoblastomycosis: a retrospective study of 325 cases on Amazonic Region (Brazil) Mycopathologia. ,vol. 143, pp. 171- 175 ,(1998) , 10.1023/A:1006957415346
Maya Chandrani Attapattu, Chromoblastomycosis--a clinical and mycological study of 71 cases from Sri Lanka. Mycopathologia. ,vol. 137, pp. 145- 151 ,(1997) , 10.1023/A:1006819530825
V.A. Vicente, D. Attili-Angelis, M.R. Pie, F. Queiroz-Telles, L.M. Cruz, M.J. Najafzadeh, G.S. de Hoog, J. Zhao, A. Pizzirani-Kleiner, Environmental isolation of black yeast-like fungi involved in human infection Studies in Mycology. ,vol. 61, pp. 137- 144 ,(2008) , 10.3114/SIM.2008.61.14
J.I. Lyons, S.Y. Newell, A. Buchan, M.A. Moran, Diversity of ascomycete laccase gene sequences in a southeastern US salt marsh. Microbial Ecology. ,vol. 45, pp. 270- 281 ,(2003) , 10.1007/S00248-002-1055-7
S. V. Suresh Kumar, Prashant S. Phale, S. Durani, Pramod P. Wangikar, Combined sequence and structure analysis of the fungal laccase family Biotechnology and Bioengineering. ,vol. 83, pp. 386- 394 ,(2003) , 10.1002/BIT.10681
S. Deng, A.H.G. Gerrits van den Ende, A.F.J. Ram, M. Arentshorst, Y. Gräser, H. Hu, G.S. de Hoog, Evolution of CDC42, a putative virulence factor triggering meristematic growth in black yeasts Studies in Mycology. ,vol. 61, pp. 121- 129 ,(2008) , 10.3114/SIM.2008.61.12