Feature selection for siRNA efficacy prediction using natural computation
作者： Chakresh Kumar Jain , Yamuna Prasad
DOI: 10.1109/NABIC.2009.5393630
关键词:
摘要: RNAi is a naturally occurring, highly conserved phenomenon of RNA mediated gene silencing among the multicellular organisms. Currently, has been successfully applied in functional genomics, therapeutics and new drug target identification mammals other eukaryotes. The uniqueness lies sequence specific knock down which made an indispensible technology.
sci-hub.se 参考文章(29)
Jean-Philippe Vert, Nicolas Foveau, Christian Lajaunie, Yves Vandenbrouck, An accurate and interpretable model for siRNA efficacy prediction. BMC Bioinformatics. ,vol. 7, pp. 520- 520 ,(2006) , 10.1186/1471-2105-7-520
Sayda M. Elbashir, Jens Harborth, Winfried Lendeckel, Abdullah Yalcin, Klaus Weber, Thomas Tuschl, Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells Nature. ,vol. 411, pp. 494- 498 ,(2001) , 10.1038/35078107
Hamidreza Rashidy Kanan, Karim Faez, Sayyed Mostafa Taheri, Feature Selection Using Ant Colony Optimization (ACO): A New Method and Comparative Study in the Application of Face Recognition System Advances in Data Mining. Theoretical Aspects and Applications. pp. 63- 76 ,(2007) , 10.1007/978-3-540-73435-2_6
Deyu Zhou, Yulan He, Chee Keong Kwoh, Hao Wang, Ant-MST: An Ant-Based Minimum Spanning Tree for Gene Expression Data Clustering Pattern Recognition in Bioinformatics. pp. 198- 205 ,(2007) , 10.1007/978-3-540-75286-8_20
Yulan He, Siu Cheung Hui, Yongxiang Sim, A novel ant-based clustering approach for document clustering asia information retrieval symposium. pp. 537- 544 ,(2006) , 10.1007/11880592_43
Olga Matveeva, Yury Nechipurenko, Leo Rossi, Barry Moore, Pål Sætrom, Aleksey Y Ogurtsov, John F Atkins, Svetlana A Shabalina, Comparison of approaches for rational siRNA design leading to a new efficient and transparent method Nucleic Acids Research. ,vol. 35, ,(2007) , 10.1093/NAR/GKM088
Masatoshi Ichihara, Yoshiki Murakumo, Akio Masuda, Toru Matsuura, Naoya Asai, Mayumi Jijiwa, Maki Ishida, Jun Shinmi, Hiroshi Yatsuya, Shanlou Qiao, Masahide Takahashi, Kinji Ohno, Thermodynamic instability of siRNA duplex is a prerequisite for dependable prediction of siRNA activities Nucleic Acids Research. ,vol. 35, ,(2007) , 10.1093/NAR/GKM699
Pål Sætrom, Ola Snøve, A comparison of siRNA efficacy predictors Biochemical and Biophysical Research Communications. ,vol. 321, pp. 247- 253 ,(2004) , 10.1016/J.BBRC.2004.06.116
S I Pai, Y-Y Lin, B Macaes, A Meneshian, C-F Hung, T-C Wu, Prospects of RNA interference therapy for cancer. Gene Therapy. ,vol. 13, pp. 464- 477 ,(2006) , 10.1038/SJ.GT.3302694
Qi Liu, Irina Dinu, Adeniyi J Adewale, John D Potter, Yutaka Yasui, Comparative evaluation of gene-set analysis methods BMC Bioinformatics. ,vol. 8, pp. 431- 431 ,(2007) , 10.1186/1471-2105-8-431