Fourteen polymorphic microsatellite DNA markers for the human malaria parasite Plasmodium vivax

作者: N. D. KARUNAWEERA , M. U. FERREIRA , D. L. HARTL , D. F. WIRTH

DOI: 10.1111/J.1471-8286.2006.01534.X

关键词:

摘要: We have optimized a set of 14 polymorphic microsatellite markers for the human malaria parasite Plasmodium vivax, all them consisting either tri- or tetranucleotide repeats. These markers, whose polymerase chain reaction amplification conditions are identical, were used to screen 25 isolates from malaria-endemic areas in Sri Lanka. The total number alleles per locus ranged between 6 and 13 (average, 7.8), expected heterozygosity 0.627 0.913 0.790). now being characterize population structure P. vivax other endemic areas.

参考文章(11)
M. C. Leclerc, P. Durand, C. Gauthier, S. Patot, N. Billotte, M. Menegon, C. Severini, F. J. Ayala, F. Renaud, Meager genetic variability of the human malaria agent Plasmodium vivax Proceedings of the National Academy of Sciences of the United States of America. ,vol. 101, pp. 14455- 14460 ,(2004) , 10.1073/PNAS.0405186101
Liwang Cui, Ananias A. Escalante, Mallika Imwong, Georges Snounou, The genetic diversity of Plasmodium vivax populations Trends in Parasitology. ,vol. 19, pp. 220- 226 ,(2003) , 10.1016/S1471-4922(03)00085-0
Frank B Dean, Seiyu Hosono, Linhua Fang, Xiaohong Wu, A Fawad Faruqi, Patricia Bray-Ward, Zhenyu Sun, Qiuling Zong, Yuefen Du, Jing Du, Mark Driscoll, Wanmin Song, Stephen F Kingsmore, Michael Egholm, Roger S Lasken, None, Comprehensive human genome amplification using multiple displacement amplification Proceedings of the National Academy of Sciences of the United States of America. ,vol. 99, pp. 5261- 5266 ,(2002) , 10.1073/PNAS.082089499
K Mendis, P Marchesini, R Carter, BJ Sina, The neglected burden of Plasmodium vivax malaria American Journal of Tropical Medicine and Hygiene. ,vol. 64, pp. 97- 106 ,(2001) , 10.4269/AJTMH.2001.64.97
M Imwong, D Sudimack, S Pukrittayakamee, L Osorio, J Carlton, N Day, N White, T Anderson, Microsatellite Variation, Repeat Array Length, and Population History of Plasmodium vivax Molecular Biology and Evolution. ,vol. 23, pp. 1016- 1018 ,(2006) , 10.1093/MOLBEV/MSJ116
G. Benson, Tandem repeats finder: a program to analyze DNA sequences Nucleic Acids Research. ,vol. 27, pp. 573- 580 ,(1999) , 10.1093/NAR/27.2.573
Ricardo LD Machado, Marinete M Pó voa, Vanja SP Calvosa, Marcelo U Ferreira, Andrea RB Rossit, Eduardo JM dos Santos, David J Conway, None, Genetic structure of Plasmodium falciparum populations in the Brazilian Amazon region. The Journal of Infectious Diseases. ,vol. 190, pp. 1547- 1555 ,(2004) , 10.1086/424601
Jane Carlton, The Plasmodium vivax genome sequencing project Trends in Parasitology. ,vol. 19, pp. 227- 231 ,(2003) , 10.1016/S1471-4922(03)00066-7
Timothy J. C. Anderson, Xin-Zhuan Su, AndreW. Roddam, Karen P. Day, Complex mutations in a high proportion of microsatellite loci from the protozoan parasite Plasmodium falciparum. Molecular Ecology. ,vol. 9, pp. 1599- 1608 ,(2000) , 10.1046/J.1365-294X.2000.01057.X
JOHN C. GOMEZ, PETER A. ZIMMERMAN, MOSES J. BOCKARIE, DAVID T. MCNAMARA, J. KEVIN BAIRD, JANE M. CARLTON, IDENTIFICATION OF A POLYMORPHIC PLASMODIUM VIVAX MICROSATELLITE MARKER American Journal of Tropical Medicine and Hygiene. ,vol. 69, pp. 377- 379 ,(2003) , 10.4269/AJTMH.2003.69.377