Supercoiling Induced by Transcription

作者: D. N. Cook , D. Ma , J. E. Hearst

DOI: 10.1007/978-3-642-78666-2_7

关键词:

摘要: The biological implications of supercoiling by transcription are potentially significant (Pruss and Drlica 1989; Lilley Higgins 1991), a fundamental question is the extent to which determines level DNA in vivo. Transcription can induce template virtue topological relationship between elongating RNA polymerase (Liu Wang 1987). In some models, elongation requires that follows helical screw such there one 360° rotation enzyme for each 10.5 bp transcribed (Gamper Hearst 1982). Since elongates at rate about 40 nucleotides/s, an efficiently anchored complex should introduce approximately four negative super-turns upstream positive superturns downstream from actively expressed gene second. This would suggest extraordinarily fast rates localized after onset transcription. goal this chapter summarize examine our understanding kinetics mechanisms induced relate these insights mechanics elongation.

参考文章(30)
B. ten Heggeler-Bordier, W. Wahli, M. Adrian, A. Stasiak, J. Dubochet, The apical localization of transcribing RNA polymerases on supercoiled DNA prevents their rotation around the template. The EMBO Journal. ,vol. 11, pp. 667- 672 ,(1992) , 10.1002/J.1460-2075.1992.TB05098.X
J K Lodge, T Kazic, D E Berg, Formation of supercoiling domains in plasmid pBR322. Journal of Bacteriology. ,vol. 171, pp. 2181- 2187 ,(1989) , 10.1128/JB.171.4.2181-2187.1989
H S Koo, H Y Wu, L F Liu, Effects of transcription and translation on gyrase-mediated DNA cleavage in Escherichia coli. Journal of Biological Chemistry. ,vol. 265, pp. 12300- 12305 ,(1990) , 10.1016/S0021-9258(19)38345-0
Marc Adrian, Beatrice ten Heggeler‐Bordier, Walter Wahli, Alicja Z Stasiak, Andrzej Stasiak, Jacques Dubochet, None, Direct visualization of supercoiled DNA molecules in solution. The EMBO Journal. ,vol. 9, pp. 4551- 4554 ,(1990) , 10.1002/J.1460-2075.1990.TB07907.X
J K Lodge, D E Berg, Mutations that affect Tn5 insertion into pBR322: importance of local DNA supercoiling. Journal of Bacteriology. ,vol. 172, pp. 5956- 5960 ,(1990) , 10.1128/JB.172.10.5956-5960.1990
Steven J. Brill, Rolf Sternglanz, Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants Cell. ,vol. 54, pp. 403- 411 ,(1988) , 10.1016/0092-8674(88)90203-6
A. Rahmouni, R. Wells, Stabilization of Z DNA in vivo by localized supercoiling Science. ,vol. 246, pp. 358- 363 ,(1989) , 10.1126/SCIENCE.2678475
Hai-Young Wu, Shihua Shyy, James C. Wang, Leroy F. Liu, Transcription generates positively and negatively supercoiled domains in the template Cell. ,vol. 53, pp. 433- 440 ,(1988) , 10.1016/0092-8674(88)90163-8