Conformational analysis of capsaicin using 13 C, 15 N MAS NMR, GIAO DFT and GA calculations

作者: Paweł Siudem , Katarzyna Paradowska , Jarosław Bukowicki

DOI: 10.1016/J.MOLSTRUC.2017.05.142

关键词:

摘要: Abstract Capsaicin produced by plants from genus Capsicum exerts multiple pharmacological effects and has found applications in food pharmaceutical industry. The alkaloid was studied a combined approach: solid-state NMR, GA conformational search GIAO DFT methods. 13 C CPMAS NMR spectra were recorded using variable contact time dipolar dephasing experiments. results of cross-polarization (CP) kinetics, such as T CP values long 1ρ H (100–200 ms), indicated that the capsaicin molecule is fairly mobile, especially at end aliphatic chain. 15 N MAS spectrum showed one narrow signal at −255 ppm. Genetic algorithm (GA) with multi modal optimization used to find low-energy conformations capsaicin. Theoretical calculations performed different basis sets characterize five selected conformations. validation method experimental chemical shifts compared those calculated for stable conformers. Conformational analysis suggests side chain can be bent or extended. A comparison indicates solid does not have same structure established PWXRD.

参考文章(24)
Joshua A. Rackers, Zhi Wang, Chao Lu, Marie L. Laury, Louis Lagardère, Michael J. Schnieders, Jean-Philip Piquemal, Pengyu Ren, Jay W. Ponder, Tinker 8: Software Tools for Molecular Design. Journal of Chemical Theory and Computation. ,vol. 14, pp. 5273- 5289 ,(2018) , 10.1021/ACS.JCTC.8B00529
M. Witanowski, I. stefaniak, G.A. Webb, Nitrogen NMR Spectroscopy Annual reports on NMR spectroscopy. ,vol. 5, pp. 1- 82 ,(1972) , 10.1016/S0066-4103(08)60189-1
Ravi Joshi, R Gangabhagirathi, antioxidant activity of capsaicin on radiation- induced oxidation of murine hepatic mitochondrial membrane preparation Research and Reports in Biochemistry. ,vol. 5, pp. 163- 171 ,(2015) , 10.2147/RRBC.S84270
Xiu-Ju Luo, Jun Peng, Yuan-Jian Li, Recent advances in the study on capsaicinoids and capsinoids European Journal of Pharmacology. ,vol. 650, pp. 1- 7 ,(2011) , 10.1016/J.EJPHAR.2010.09.074
A. Alberti, V. Galasso, B. Kovač, A. Modelli, F. Pichierri, Probing the Molecular and Electronic Structure of Capsaicin: A Spectroscopic and Quantum Mechanical Study Journal of Physical Chemistry A. ,vol. 112, pp. 5700- 5711 ,(2008) , 10.1021/JP801890G
Erhu Cao, Maofu Liao, Yifan Cheng, David Julius, TRPV1 structures in distinct conformations reveal activation mechanisms Nature. ,vol. 504, pp. 113- 118 ,(2013) , 10.1038/NATURE12823
Ajay N. Jain, Surflex: fully automatic flexible molecular docking using a molecular similarity-based search engine. Journal of Medicinal Chemistry. ,vol. 46, pp. 499- 511 ,(2003) , 10.1021/JM020406H
Jarosław Bukowicki, Aleksander Wawer, Katarzyna Paradowska, Conformational Analysis of Gentiobiose Using Genetic Algorithm Search and GIAO DFT Calculations with 13C CPMAS NMR as a Verification Method Journal of Carbohydrate Chemistry. ,vol. 34, pp. 145- 162 ,(2015) , 10.1080/07328303.2015.1016230
Waclaw Kolodziejski, Teresa Kasprzycka-Gutman, CP/MAS NMR in trans-β-carotene Solid State Nuclear Magnetic Resonance. ,vol. 11, pp. 177- 180 ,(1998) , 10.1016/S0926-2040(98)00032-0