Distance‐based multivariate analyses confound location and dispersion effects

作者: David I. Warton , Stephen T. Wright , Yi Wang

DOI: 10.1111/J.2041-210X.2011.00127.X

关键词:

摘要: Summary 1. A critical property of count data is its mean–variance relationship, yet this rarely considered in multivariate analysis ecology. 2. This study considers what being implicitly assumed about the relationship distance-based analyses – based on a matrix pairwise distances and effect any misspecification relationship. 3. It shown that make implicit assumptions are typically out-of-step with observed real data, which has major consequences. 4. Potential consequences are: confounding location dispersion effects ordinations; misleading results when trying to identify taxa an expressed; failure detect unless it expressed high-variance taxa. 5. Data transformation does not solve problem. 6. A solution use generalised linear models their recent generalisations, here have desirable properties.

参考文章(43)
Peter McCullagh, John Ashworth Nelder, Generalized Linear Models ,(1983)
Cajo JF ter Braak, I Colin Prentice, A Theory of Gradient Analysis Advances in Ecological Research. ,vol. 34, pp. 235- 282 ,(1988) , 10.1016/S0065-2504(03)34003-6
Kenneth J. Berry, Paul W. Mielke, Permutation Methods: A Distance Function Approach ,(2007)
Yi Wang, Ulrike Naumann, Stephen T. Wright, David I. Warton, mvabund– an R package for model‐based analysis of multivariate abundance data Methods in Ecology and Evolution. ,vol. 3, pp. 471- 474 ,(2012) , 10.1111/J.2041-210X.2012.00190.X
Nicholas J. Gotelli, Aaron M. Ellison, A Primer of Ecological Statistics ,(2004)
Robert B. O’Hara, D. Johan Kotze, Do not log-transform count data Methods in Ecology and Evolution. ,vol. 1, pp. 118- 122 ,(2010) , 10.1111/J.2041-210X.2010.00021.X
Thomas W. Yee, The VGAM Package for Categorical Data Analysis Journal of Statistical Software. ,vol. 32, pp. 1- 34 ,(2010) , 10.18637/JSS.V032.I10
NR Collins, R Williams, Zooplankton Communities in the Bristol Channel and Severn Estuary Marine Ecology Progress Series. ,vol. 9, pp. 1- 11 ,(1982) , 10.3354/MEPS009001
L. R. TAYLOR, Aggregation, Variance and the Mean Nature. ,vol. 189, pp. 732- 735 ,(1961) , 10.1038/189732A0