Sequence tag directed subassembly of short sequencing reads into long sequencing reads
作者： Joseph Hiatt , Jay Shendure , Emily Turner , Rupali Patwardhan
DOI:
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摘要: The invention provides methods for preparing DNA sequencing libraries by assembling short read data into longer contiguous sequences genome assembly, full length cDNA sequencing, metagenomics, and the analysis of repetitive assembled genomes.
google.ca 参考文章(111)
John P. Langmore, Vladimir L. Makarov, Method of producing a DNA library using positional amplification based on the use of adaptors and nick translation ,(2001)
H. Savilahti, P. A. Rice, K. Mizuuchi, The phage Mu transpososome core: DNA requirements for assembly and function. The EMBO Journal. ,vol. 14, pp. 4893- 4903 ,(1995) , 10.1002/J.1460-2075.1995.TB00170.X
N. Kleckner, R. M. Chalmers, D. Kwon, J. Sakai, S. Bolland, Tn10 and IS10 Transposition and Chromosome Rearrangements: Mechanism and Regulation In Vivo and In Vitro Current Topics in Microbiology and Immunology. ,vol. 204, pp. 49- 82 ,(1996) , 10.1007/978-3-642-79795-8_3
G.T. Walker, C.A. Spargo, C.M. Nycz, J.A. Down, M.S. Dey, A.H. Walters, D.R. Howard, W.E. Keating, M.C. Little, J.G. Nadeau, S.R. Jurgensen, V.R. Neece, P. Zwadyk, 15 – A Chemiluminescent DNA Probe Test Based on Strand Displacement Amplification Molecular Methods for Virus Detection. pp. 329- 349 ,(1995) , 10.1016/B978-012748920-9/50016-9
R. H. A. Plasterk, The Tc1/mariner transposon family. Current Topics in Microbiology and Immunology. ,vol. 204, pp. 125- 143 ,(1996) , 10.1007/978-3-642-79795-8_6
Shiao-Chun Tu, James Briggs, Xiaolian Gao, Richard Willson, Susan Hardin, Methods for real-time single molecule sequence determination ,(2004)
Roberto Solexa Limited Rigatti, Tobias William Barr Solexa Limited Ost, Lu Zhang, David Harley Lloyd, Gary Paul Schroth, Jonathon Mark Solexa Limited Bouttell, Isothermal methods for creating clonal single molecule arrays ,(2007)
Paul M. Lizardi, Xiaohua Huang, Zhengrong Zhu, Patricia Bray-Ward, David C. Thomas, David C. Ward, Mutation detection and single-molecule counting using isothermal rolling-circle amplification Nature Genetics. ,vol. 19, pp. 225- 232 ,(1998) , 10.1038/898
H Ichikawa, E Ohtsubo, In vitro transposition of transposon Tn3. Journal of Biological Chemistry. ,vol. 265, pp. 18829- 18832 ,(1990) , 10.1016/S0021-9258(17)30588-4