Towards developing a criterion to characterize non-covalent bonds: a quantum mechanical study.

作者: G. Narahari Sastry , G. Narahari Sastry , G. Narahari Sastry , Soumen Saha , Soumen Saha

DOI: 10.1039/D0CP05689H

关键词:

摘要: Chemical bonds are central to chemistry, biology, and allied fields, but still, the criterion characterize an interaction as a non-covalent bond has not been studied rigorously. Therefore, in this study, we have attempted by considering total of 85 model systems depicting different chemical comprising 43 42 other such covalent, ionic, coordinate bonds. The characterization done based on energy, energy decomposition analysis (EDA), NCI plot, topological properties electron density. values, analysis, plot give insights into full understanding strength its nature, they fail distinctively bond. Herein, special developed parameters Topological illustrate that values both ∇2ρ H(r) positive with value ρ < 0.03 a.u. [−G(r)/V(r)] ≥ 1.00 for increases up 0.06 negative if is partially covalent nature. G(r) suggests it dominates greater than 50% contribution, whereas contribution varies between 35 case which likely be very helpful comprehend ascertain well complex biological systems.

参考文章(149)
R. F. W. Bader, A Bond Path: A Universal Indicator of Bonded Interactions Journal of Physical Chemistry A. ,vol. 102, pp. 7314- 7323 ,(1998) , 10.1021/JP981794V
A.D. Buckingham, J.E. Del Bene, S.A.C. McDowell, The hydrogen bond Chemical Physics Letters. ,vol. 463, pp. 1- 10 ,(2008) , 10.1016/J.CPLETT.2008.06.060
Bhaskar Sharma, Deivasigamani Umadevi, G. Narahari Sastry, Contrasting preferences of N and P substituted heteroaromatics towards metal binding: probing the regioselectivity of Li+ and Mg2+ binding to (CH)6−m−nNmPn Physical Chemistry Chemical Physics. ,vol. 14, pp. 13922- 13932 ,(2012) , 10.1039/C2CP41834G
Justin M. Turney, Andrew C. Simmonett, Robert M. Parrish, Edward G. Hohenstein, Francesco A. Evangelista, Justin T. Fermann, Benjamin J. Mintz, Lori A. Burns, Jeremiah J. Wilke, Micah L. Abrams, Nicholas J. Russ, Matthew L. Leininger, Curtis L. Janssen, Edward T. Seidl, Wesley D. Allen, Henry F. Schaefer, Rollin A. King, Edward F. Valeev, C. David Sherrill, T. Daniel Crawford, Psi4: an open-source ab initio electronic structure program Wiley Interdisciplinary Reviews: Computational Molecular Science. ,vol. 2, pp. 556- 565 ,(2012) , 10.1002/WCMS.93
Michel Mons, Iliana Dimicoli, Benjamin Tardivel, François Piuzzi, Valérie Brenner, Philippe Millié, Energetics of a model NH–π interaction: the gas phase benzene–NH3 complex Physical Chemistry Chemical Physics. ,vol. 4, pp. 571- 576 ,(2002) , 10.1039/B108146M
Pierangelo Metrangolo, Franck Meyer, Tullio Pilati, Giuseppe Resnati, Giancarlo Terraneo, Halogen Bonding in Supramolecular Chemistry Angewandte Chemie. ,vol. 47, pp. 6114- 6127 ,(2008) , 10.1002/ANIE.200800128
Chinthapalli Dinesh Kumar, Bhaskar Sharma, Yarasi Soujanya, Vadla Naresh Chary, Santhosh Reddy Patpi, Srinivas Kantevari, Garikapati Narahari Sastry, Sripadi Prabhakar, None, Evaluating the cation binding strength and selectivity of calix[4]pyrroles: a computational and ESI-MS/MS study Physical Chemistry Chemical Physics. ,vol. 16, pp. 17266- 17271 ,(2014) , 10.1039/C4CP01647E
M. Althaf Hussain, A. Subha Mahadevi, G. Narahari Sastry, Estimating the binding ability of onium ions with CO2 and π systems: a computational investigation Physical Chemistry Chemical Physics. ,vol. 17, pp. 1763- 1775 ,(2015) , 10.1039/C4CP03434A