Molecular docking and pharmacophoric modelling of 1,5-disubstituted tetrazoles as inhibitors of two proteins present in cancer, the ABL and the mutated T315I kinase.

作者: Erik Díaz-Cervantes , Carlos J. Cortés-García , Luis Chacón-García , Abel Suárez-Castro

DOI: 10.1007/S40203-020-00059-6

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摘要: A docking study of a set several 1,5-disubstituted tetrazoles compounds has been performed to predict the poses some potential inhibitors Abelson tyrosine-protein kinase and mutated T315I. The was conducted through Lamarckian genetic algorithms in Autodock4 package. Bayesian calculations were performed; specificity sensitivity values as well positive predicted values, negative calculated using 99 known experimentally active ligands 385 decoys for from Directory Useful Decoys database. Root mean square deviation though X-ray crystallographic data bioactive pose imatinib reference, obtained with above methods. results show importance protein interactions halogens present these ligands, presence hydrophobic fragments, via pharmacophoric model, concluding that eight novels herein identified, could be effective kinase, calculations.

参考文章(45)
Peng Wu, Thomas E. Nielsen, Mads H. Clausen, Small-molecule kinase inhibitors: an analysis of FDA-approved drugs. Drug Discovery Today. ,vol. 21, pp. 5- 10 ,(2016) , 10.1016/J.DRUDIS.2015.07.008
M F Sanner, Python: a programming language for software integration and development. Journal of Molecular Graphics & Modelling. ,vol. 17, pp. 57- 61 ,(1999)
Nikolas von Bubnoff, Justus Duyster, Chronic Myelogenous Leukemia Deutsches Aerzteblatt Online. ,vol. 107, pp. 114- 121 ,(2010) , 10.3238/ARZTEBL.2010.0114
Sunil K Panigrahi, Abhishek Tiwari, HBAT: a complete package for analysing strong and weak hydrogen bonds in macromolecular crystal structures. in Silico Biology. ,vol. 7, pp. 651- 661 ,(2007)
Yunxiang Lu, Yong Wang, Weiliang Zhu, Nonbonding interactions of organic halogens in biological systems: implications for drug discovery and biomolecular design Physical Chemistry Chemical Physics. ,vol. 12, pp. 4543- 4551 ,(2010) , 10.1039/B926326H
Michele Baccarani, Michael W. Deininger, Gianantonio Rosti, Andreas Hochhaus, Simona Soverini, Jane F. Apperley, Francisco Cervantes, Richard E. Clark, Jorge E. Cortes, François Guilhot, Henrik Hjorth-Hansen, Timothy P. Hughes, Hagop M. Kantarjian, Dong-Wook Kim, Richard A. Larson, Jeffrey H. Lipton, François-Xavier Mahon, Giovanni Martinelli, Jiri Mayer, Martin C. Müller, Dietger Niederwieser, Fabrizio Pane, Jerald P. Radich, Philippe Rousselot, Giuseppe Saglio, Susanne Saußele, Charles Schiffer, Richard Silver, Bengt Simonsson, Juan-Luis Steegmann, John M. Goldman, Rüdiger Hehlmann, European LeukemiaNet recommendations for the management of chronic myeloid leukemia: 2013 Blood. ,vol. 122, pp. 872- 884 ,(2013) , 10.1182/BLOOD-2013-05-501569
THOMAS MUIR, Symbols of Acceleration Nature. ,vol. 5, pp. 102- 103 ,(1871) , 10.1038/005102C0
Sandhya Kortagere, Sean Ekins, William J. Welsh, Halogenated ligands and their interactions with amino acids: Implications for structure–activity and structure–toxicity relationships Journal of Molecular Graphics and Modelling. ,vol. 27, pp. 170- 177 ,(2008) , 10.1016/J.JMGM.2008.04.001
Douglas E. V. Pires, Tom L. Blundell, David B. Ascher, pkCSM: Predicting Small-Molecule Pharmacokinetic and Toxicity Properties Using Graph-Based Signatures Journal of Medicinal Chemistry. ,vol. 58, pp. 4066- 4072 ,(2015) , 10.1021/ACS.JMEDCHEM.5B00104