Implications of aromatic–aromatic interactions: From protein structures to peptide models

作者: Kamlesh Madhusudan Makwana , Radhakrishnan Mahalakshmi

DOI: 10.1002/PRO.2814

关键词:

摘要: With increasing structural information on proteins, the opportunity to understand physical forces governing protein folding is also expanding. One of significant non-covalent between side chains aromatic-aromatic interactions. Aromatic interactions have been widely exploited and thoroughly investigated in context folding, stability, molecular recognition, self-assembly processes. Through this review, we discuss contribution aromatic activity stability thermophilic, mesophilic, psychrophilic proteins. Being hydrophobic, amino acids tend reside hydrophobic interior or transmembrane segments In such positions, it can play a diverse role soluble membrane α-helix β-sheet stabilization. We highlight here some excellent investigations made using peptide models several approaches involving aryl-aryl interactions, as an increasingly popular strategy engineering. A recent survey described existence clusters (trimer, tetramer, pentamer, higher order assemblies), revealing self-associating property aryl groups, even folded structures. The application aromatics generation modern bionanomaterials discussed.

参考文章(108)
Jennifer C. Ma, Dennis A. Dougherty, The Cationminus signpi Interaction. Chemical Reviews. ,vol. 97, pp. 1303- 1324 ,(1997) , 10.1021/CR9603744
A. Sengupta, R. Mahalakshmi, N. Shamala, P. Balaram, Aromatic interactions in tryptophan-containing peptides: crystal structures of model tryptophan peptides and phenylalanine analogs. Journal of Peptide Research. ,vol. 65, pp. 113- 129 ,(2008) , 10.1111/J.1399-3011.2004.00191.X
Matthew G. Woll, Erik B. Hadley, Sandro Mecozzi, Samuel H. Gellman, Stabilizing and Destabilizing Effects of Phenylalanine → F5-Phenylalanine Mutations on the Folding of a Small Protein Journal of the American Chemical Society. ,vol. 128, pp. 15932- 15933 ,(2006) , 10.1021/JA0634573
Christopher C. Valley, Alessandro Cembran, Jason D. Perlmutter, Andrew K. Lewis, Nicholas P. Labello, Jiali Gao, Jonathan N. Sachs, The Methionine-aromatic motif plays a unique role in stabilizing protein structure Journal of Biological Chemistry. ,vol. 287, pp. 34979- 34991 ,(2012) , 10.1074/JBC.M112.374504
Florian Cymer, Gunnar von Heijne, Stephen H. White, Mechanisms of Integral Membrane Protein Insertion and Folding Journal of Molecular Biology. ,vol. 427, pp. 999- 1022 ,(2015) , 10.1016/J.JMB.2014.09.014
Mukesh Mahajan, Surajit Bhattacharjya, Designed di-heme binding helical transmembrane protein. ChemBioChem. ,vol. 15, pp. 1257- 1262 ,(2014) , 10.1002/CBIC.201402142
Daniel Otzen, Membrane protein folding and stability. Archives of Biochemistry and Biophysics. ,vol. 564, pp. 262- 264 ,(2014) , 10.1016/J.ABB.2014.10.014
Takahiro Takekiyo, Ling Wu, Yukihiro Yoshimura, Akio Shimizu, Timothy A. Keiderling, Relationship between Hydrophobic Interactions and Secondary Structure Stability for Trpzip β-Hairpin Peptides Biochemistry. ,vol. 48, pp. 1543- 1552 ,(2009) , 10.1021/BI8019838