Automating data sharing through authoring tools

作者: John R. Kitchin , Ana E. Van Gulick , Lisa D. Zilinski

DOI: 10.1007/S00799-016-0173-7

关键词:

摘要: In the current scientific publishing landscape, there is a need for an authoring workflow that easily integrates data and code into manuscripts enables to be published in reusable form. Automated embedding of output will enable superior communication archiving. this work, we demonstrate proof concept workflow, org-mode, which successfully provides capability integration. We illustrate series examples potential uses workflow. First, use on citation counts compute h-index author, show two calculating h-index. The source each example automatically embedded PDF during export document. how can image files, themselves are Finally, metadata about files included exported PDF, accessed by computer programs. our customized export, attached Info field. A program could parse get list carry out analyses them. Authoring tools such as Emacs + org-mode greatly facilitate integration technical writing. These also automate document formats intended consumption.

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