The IncRNAs PCGEM1 and PRNCR1 are not implicated in castration resistant prostate cancer.

作者: John R. Prensner , Anirban Sahu , Matthew K. Iyer , Rohit Malik , Benjamin Chandler

DOI: 10.18632/ONCOTARGET.1846

关键词:

摘要: Long noncoding RNAs (IncRNAs) are increasingly implicated in cancer biology, contributing to essential cell functions such as proliferation, invasion, and metastasis. In prostate cancer, several lncRNAs have been nominated critical actors disease pathogenesis. Among these, expression of PCGEM1 PRNCR1 has identified a possible component progression through the coordination androgen receptor (AR) signaling (Yang et al., Nature 2013, see ref. [1]). However, concerns regarding robustness these findings suggested. Here, we sought evaluate whether associated with cancer. Through comprehensive analysis RNA-sequencing data (RNA-seq), find evidence that but not is We employ large cohort >230 high-risk patients long-term outcomes show that, contrast prior reports, neither gene poor patient outcomes. further observe no nor interact AR, AR signaling. Thus, conclusively demonstrate prognostic refute suggestions

参考文章(21)
Jack A Schalken, Daphne Hessels, Tilly W Aalders, Lambertus A Kiemeney, Dorine W Swinkels, Rian W Roelofs, Jacques B de Kok, Gerald W Verhaegh, DD3(PCA3), a very sensitive and specific marker to detect prostate tumors. Cancer Research. ,vol. 62, pp. 2695- 2698 ,(2002)
Gyorgy Petrovics, Wei Zhang, Mazen Makarem, Jesse P Street, Roger Connelly, Leon Sun, Isabell A Sesterhenn, Vasantha Srikantan, Judd W Moul, Shiv Srivastava, Elevated expression of PCGEM1 , a prostate-specific gene with cell growth-promoting function, is associated with high-risk prostate cancer patients Oncogene. ,vol. 23, pp. 605- 611 ,(2004) , 10.1038/SJ.ONC.1207069
John R Prensner, Matthew K Iyer, Anirban Sahu, Irfan A Asangani, Qi Cao, Lalit Patel, Ismael A Vergara, Elai Davicioni, Nicholas Erho, Mercedeh Ghadessi, Robert B Jenkins, Timothy J Triche, Rohit Malik, Rachel Bedenis, Natalie McGregor, Teng Ma, Wei Chen, Sumin Han, Xiaojun Jing, Xuhong Cao, Xiaoju Wang, Benjamin Chandler, Wei Yan, Javed Siddiqui, Lakshmi P Kunju, Saravana M Dhanasekaran, Kenneth J Pienta, Felix Y Feng, Arul M Chinnaiyan, The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex Nature Genetics. ,vol. 45, pp. 1392- 1403 ,(2013) , 10.1038/NG.2771
K. Kannan, L. Wang, J. Wang, M. M. Ittmann, W. Li, L. Yen, Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing Proceedings of the National Academy of Sciences of the United States of America. ,vol. 108, pp. 9172- 9177 ,(2011) , 10.1073/PNAS.1100489108
Markus Kretz, Zurab Siprashvili, Ci Chu, Dan E. Webster, Ashley Zehnder, Kun Qu, Carolyn S. Lee, Ross J. Flockhart, Abigail F. Groff, Jennifer Chow, Danielle Johnston, Grace E. Kim, Robert C. Spitale, Ryan A. Flynn, Grace X. Y. Zheng, Subhadra Aiyer, Arjun Raj, John L. Rinn, Howard Y. Chang, Paul A. Khavari, Control of somatic tissue differentiation by the long non-coding RNA TINCR Nature. ,vol. 493, pp. 231- 235 ,(2013) , 10.1038/NATURE11661
Jong-Seo Kim, Matthew E. Monroe, David G. Camp, Richard D. Smith, Wei-Jun Qian, In-Source Fragmentation and the Sources of Partially Tryptic Peptides in Shotgun Proteomics Journal of Proteome Research. ,vol. 12, pp. 910- 916 ,(2013) , 10.1021/PR300955F
Shancheng Ren, Zhiyu Peng, Jian-Hua Mao, Yongwei Yu, Changjun Yin, Xin Gao, Zilian Cui, Jibin Zhang, Kang Yi, Weidong Xu, Chao Chen, Fubo Wang, Xinwu Guo, Ji Lu, Jun Yang, Min Wei, Zhijian Tian, Yinghui Guan, Liang Tang, Chuanliang Xu, Linhui Wang, Xu Gao, Wei Tian, Jian Wang, Huanming Yang, Jun Wang, Yinghao Sun, RNA-seq analysis of prostate cancer in the Chinese population identifies recurrent gene fusions, cancer-associated long noncoding RNAs and aberrant alternative splicings Cell Research. ,vol. 22, pp. 806- 821 ,(2012) , 10.1038/CR.2012.30
Liuqing Yang, Chunru Lin, Chunyu Jin, Joy C. Yang, Bogdan Tanasa, Wenbo Li, Daria Merkurjev, Kenneth A. Ohgi, Da Meng, Jie Zhang, Christopher P. Evans, Michael G. Rosenfeld, lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs Nature. ,vol. 500, pp. 598- 602 ,(2013) , 10.1038/NATURE12451
V. Srikantan, Z. Zou, G. Petrovics, L. Xu, M. Augustus, L. Davis, J. R. Livezey, T. Connell, I. A. Sesterhenn, K. Yoshino, G. S. Buzard, F. K. Mostofi, D. G. McLeod, J. W. Moul, S. Srivastava, PCGEM1, a prostate-specific gene, is overexpressed in prostate cancer Proceedings of the National Academy of Sciences of the United States of America. ,vol. 97, pp. 12216- 12221 ,(2000) , 10.1073/PNAS.97.22.12216
John L. Rinn, Howard Y. Chang, Genome Regulation by Long Noncoding RNAs Annual Review of Biochemistry. ,vol. 81, pp. 145- 166 ,(2012) , 10.1146/ANNUREV-BIOCHEM-051410-092902